Comparing AZOBR_RS14870 FitnessBrowser__azobra:AZOBR_RS14870 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1co6A Crystal structure of ferrocytochrome c2 from rhodopseudomonas viridis (see paper)
48% identity, 79% coverage: 25:124/126 of query aligns to 2:99/107 of 1co6A
P00083 Cytochrome c2 from Blastochloris viridis (Rhodopseudomonas viridis) (see 2 papers)
46% identity, 77% coverage: 28:124/126 of query aligns to 25:119/127 of P00083
Sites not aligning to the query:
3m97X Structure of the soluble domain of cytochrome c552 with its flexible linker segment from paracoccus denitrificans (see paper)
50% identity, 83% coverage: 23:126/126 of query aligns to 19:118/118 of 3m97X
P00080 Cytochrome c2 from Rhodopila globiformis (Rhodopseudomonas globiformis) (see paper)
42% identity, 86% coverage: 19:126/126 of query aligns to 1:106/106 of P00080
P00047 Cytochrome c from Thermomyces lanuginosus (Humicola lanuginosa) (see paper)
39% identity, 84% coverage: 19:124/126 of query aligns to 4:108/111 of P00047
2yk3A Crithidia fasciculata cytochromE C (see paper)
45% identity, 81% coverage: 25:126/126 of query aligns to 9:109/110 of 2yk3A
P00078 Cytochrome c; Cytochrome c555 from Crithidia fasciculata (see paper)
45% identity, 81% coverage: 25:126/126 of query aligns to 13:113/114 of P00078
Sites not aligning to the query:
1hroA Molecular structure of a high potential cytochrome c2 isolated from rhodopila globiformis (see paper)
42% identity, 85% coverage: 20:126/126 of query aligns to 1:105/105 of 1hroA
1lfmA Crystal structure of cobalt(iii)-substituted cytochromE C (tuna) (see paper)
45% identity, 78% coverage: 25:122/126 of query aligns to 2:98/103 of 1lfmA
1i54A CytochromE C (tuna) 2fe:1zn mixed-metal porphyrins (see paper)
45% identity, 78% coverage: 25:122/126 of query aligns to 2:98/103 of 1i54A
4dy9A Leishmania major peroxidase is a cytochromE C peroxidase (see paper)
43% identity, 81% coverage: 25:126/126 of query aligns to 8:108/108 of 4dy9A
4gedB Crystal structure of the leishmania major peroxidase-cytochromE C complex (see paper)
43% identity, 81% coverage: 25:126/126 of query aligns to 2:102/102 of 4gedB
P00077 Cytochrome c; Cytochrome c557 from Strigomonas oncopelti (Parasitic flagellate) (Crithidia oncopelti) (see 2 papers)
45% identity, 81% coverage: 25:126/126 of query aligns to 13:113/113 of P00077
Sites not aligning to the query:
P00025 Cytochrome c from Katsuwonus pelamis (Skipjack tuna) (Bonito) (see 2 papers)
44% identity, 78% coverage: 25:122/126 of query aligns to 3:99/104 of P00025
Sites not aligning to the query:
1cycA The crystal structure of bonito (katsuo) ferrocytochromE C at 2.3 angstroms resolution. Ii. Structure and function (see paper)
44% identity, 78% coverage: 25:122/126 of query aligns to 2:98/103 of 1cycA
P00048 Cytochrome c from Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (see 5 papers)
39% identity, 81% coverage: 23:124/126 of query aligns to 5:105/108 of P00048
Sites not aligning to the query:
7ljxA Oxidized rat cytochromE C mutant (k53q) (see paper)
45% identity, 78% coverage: 25:122/126 of query aligns to 2:98/104 of 7ljxA
P21665 Cytochrome c from Varanus varius (Lace monitor lizard) (Lacerta varia) (see paper)
43% identity, 79% coverage: 25:124/126 of query aligns to 3:101/105 of P21665
Sites not aligning to the query:
P00037 Cytochrome c from Samia cynthia (Ailanthus silkmoth) (Phalaena cynthia) (see paper)
44% identity, 81% coverage: 23:124/126 of query aligns to 5:105/108 of P00037
Sites not aligning to the query:
P19974 Cytochrome c 2.1 from Caenorhabditis elegans (see paper)
40% identity, 79% coverage: 23:122/126 of query aligns to 6:103/111 of P19974
Sites not aligning to the query:
>AZOBR_RS14870 FitnessBrowser__azobra:AZOBR_RS14870
MNKHILGAALIAGIAMGAGAAQAADAAAGKDVFKQCMACHTAEQGKNKVGPSLFGVVGRP
AASIDGFKYSKPMQEKAAGGLTWTPDNLKAYITAPKEVVPGGTMAFAGIKDAGKVDDLVA
FLAEQK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory