SitesBLAST – Find functional sites

 

SitesBLAST

Comparing AZOBR_RS18455 FitnessBrowser__azobra:AZOBR_RS18455 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 2 hits to proteins with known functional sites (download)

P70994 2-hydroxymuconate tautomerase; (2Z,4E)-2-hydroxyhexa-2,4-dienedioate keto-enol isomerase; 4-oxalocrotonate tautomerase; 4-OT; EC 5.3.2.6 from Bacillus subtilis (strain 168) (see paper)
39% identity, 100% coverage: 1:62/62 of query aligns to 1:62/62 of P70994

query
sites
P70994
M
 
M
P
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P
L
 
Y
I
 
V
N
 
T
V
 
V
Q
 
K
L
 
M
F
 
L
E
 
E
G
 
G
R
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R
T
 
T
L
 
D
E
 
E
Q
 
Q
K
 
K
R
 
R
A
 
N
Y
 
L
A
 
V
K
 
E
A
 
K
L
 
V
T
 
T
D
 
E
A
 
A
S
 
V
V
 
K
A
 
E
V
 
T
L
 
T
G
 
G
C
 
A
S
 
S
P
 
E
E
 
E
A
 
K
V
 
I
D
 
V
V
 
V
I
 
F
F
 
I
H
 
E
D
 
E
V
 
M
K
 
R
K
 
K
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D
D
 
H
W
 
Y
A
 
A
S
 
V
G
 
A
G
 
G
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K
L
 
R
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L
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S
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D
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M
E
 
E

2opaA Ywhb binary complex with 2-fluoro-p-hydroxycinnamate
38% identity, 98% coverage: 2:62/62 of query aligns to 1:61/61 of 2opaA

query
sites
2opaA
P
 
P
L
 
Y
I
 
V
N
 
T
V
 
V
Q
 
K
L
x
M
F
 
L
E
 
E
G
 
G
R
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R
T
 
T
L
 
D
E
 
E
Q
 
Q
K
 
K
R
 
R
A
 
N
Y
 
L
A
 
V
K
 
E
A
 
K
L
 
V
T
 
T
D
 
E
A
 
A
S
 
V
V
 
K
A
 
E
V
 
T
L
 
T
G
 
G
C
 
A
S
 
S
P
 
E
E
 
E
A
 
K
V
 
I
D
x
V
V
 
V
I
 
F
F
 
I
H
 
E
D
 
E
V
 
M
K
 
R
K
 
K
S
 
D
D
 
H
W
x
Y
A
 
A
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V
G
 
A
G
 
G
K
 
K
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R
W
 
L
S
 
S
D
 
D
P
 
M
E
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E

Query Sequence

>AZOBR_RS18455 FitnessBrowser__azobra:AZOBR_RS18455
MPLINVQLFEGRTLEQKRAYAKALTDASVAVLGCSPEAVDVIFHDVKKSDWASGGKLWSD
PE

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory