Comparing AZOBR_RS19270 FitnessBrowser__azobra:AZOBR_RS19270 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
P68183 Maltose/maltodextrin transport system permease protein MalG from Escherichia coli (strain K12) (see 2 papers)
29% identity, 63% coverage: 90:269/286 of query aligns to 106:280/296 of P68183
4ki0F Crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to maltohexaose (see paper)
27% identity, 48% coverage: 81:217/286 of query aligns to 282:425/490 of 4ki0F
P02916 Maltose/maltodextrin transport system permease protein MalF from Escherichia coli (strain K12) (see 4 papers)
27% identity, 48% coverage: 81:217/286 of query aligns to 297:440/514 of P02916
>AZOBR_RS19270 FitnessBrowser__azobra:AZOBR_RS19270
VLPNTGGTVLSVLRKPSVLPGFGLTLGFTLTYLSLIVLLPLAALALKAAGLGWSGFWDAV
LTPRVLAAFKVSFGLSLAAAAVNAVFGFIVAWVLVRYRFPGDRIVDALVDLPFALPTAVA
GIALSALYAPNGWIGSLLMEWFGLRVAFTPLGIAIALTFIGLPFVVRTVQPILQDLPPEE
EEAAAALGATRWQAFRRVVFPALLPALLTGFALSFARGVGEYGSVIFIAGNIPGLSEILP
LLIVIKLEQYDYAGAAAVGVLMLMASFVLLLALNLLQAWMRSRHAR
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory