Comparing AZOBR_RS25885 FitnessBrowser__azobra:AZOBR_RS25885 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 4 hits to proteins with known functional sites (download)
P94529 Arabinooligosaccharides transport system permease protein AraP from Bacillus subtilis (strain 168) (see paper)
27% identity, 88% coverage: 10:267/294 of query aligns to 33:287/313 of P94529
4ki0F Crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to maltohexaose (see paper)
26% identity, 82% coverage: 42:281/294 of query aligns to 220:489/490 of 4ki0F
7cagA Mycobacterium smegmatis lpqy-sugabc complex in the catalytic intermediate state (see paper)
28% identity, 69% coverage: 84:285/294 of query aligns to 82:278/285 of 7cagA
P02916 Maltose/maltodextrin transport system permease protein MalF from Escherichia coli (strain K12) (see 4 papers)
26% identity, 70% coverage: 75:281/294 of query aligns to 285:504/514 of P02916
>AZOBR_RS25885 FitnessBrowser__azobra:AZOBR_RS25885
MDKPVNQGAWLLVLPVLLIVAFSAILPLMTVVNYSVQDTFGNNQFFWNGIGWYQELLDPS
TDLGGRFFDALWRNLLFSLLILLIEVPLGIAVALSMPRHGWRVAATLVVLALPLLIPWNV
VGTIWQIFAREDIGLLGWAVNRLGIPYNYTADPLSAWVTIVVMDVWHWTSLVALLCYAGL
RSIPDAFYQAARIDGASRWAVFRNIQLPKMHRVLLIAVLLRFMDSFMIYTEPFVVTGGGP
GNSTTFVSIDLVKLALGQFDLGKAAALSIVYNLIILAVCWVFYTVMTRMDAQRN
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory