Comparing AZOBR_RS26890 FitnessBrowser__azobra:AZOBR_RS26890 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 2 hits to proteins with known functional sites (download)
3wkuA Crystal structure of the anaerobic desb-gallate complex (see paper)
32% identity, 94% coverage: 6:113/115 of query aligns to 296:403/407 of 3wkuA
Sites not aligning to the query:
3wr9A Crystal structure of the anaerobic desb-gallate complex (see paper)
32% identity, 94% coverage: 6:113/115 of query aligns to 301:408/416 of 3wr9A
Sites not aligning to the query:
>AZOBR_RS26890 FitnessBrowser__azobra:AZOBR_RS26890
VTAPHEPIPGTTIFDGRMAMKGYPLNKMCYSFNEAAARQEFLADEEAYCAKFGLTDEQKT
AIRERNALALLAAGGNIYYLAKFIGMLGLNVQDIGAQQTGMTVEEFKAKLKAAGN
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory