Comparing AZOBR_RS27000 FitnessBrowser__azobra:AZOBR_RS27000 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 13 hits to proteins with known functional sites (download)
3e49A Crystal structure of a prokaryotic domain of unknown function (duf849) with a tim barrel fold (bxe_c0966) from burkholderia xenovorans lb400 at 1.75 a resolution
62% identity, 97% coverage: 9:316/316 of query aligns to 1:307/307 of 3e49A
3e02A Crystal structure of a duf849 family protein (bxe_c0271) from burkholderia xenovorans lb400 at 1.90 a resolution
67% identity, 97% coverage: 10:316/316 of query aligns to 5:310/310 of 3e02A
3lotD Crystal structure of protein of unknown function (np_070038.1) from archaeoglobus fulgidus at 1.89 a resolution
50% identity, 97% coverage: 12:316/316 of query aligns to 7:313/313 of 3lotD
2y7fD Crystal structure of the 3-keto-5-aminohexanoate cleavage enzyme (kce) from c. Cloacamonas acidaminovorans in complex with the substrate 3- keto-5-aminohexanoate (see paper)
31% identity, 95% coverage: 9:309/316 of query aligns to 3:277/277 of 2y7fD
2y7fA Crystal structure of the 3-keto-5-aminohexanoate cleavage enzyme (kce) from c. Cloacamonas acidaminovorans in complex with the substrate 3- keto-5-aminohexanoate (see paper)
31% identity, 95% coverage: 9:309/316 of query aligns to 3:277/277 of 2y7fA
B0VHH0 3-keto-5-aminohexanoate cleavage enzyme; EC 2.3.1.247 from Cloacimonas acidaminovorans (strain Evry) (see paper)
31% identity, 94% coverage: 12:309/316 of query aligns to 4:275/276 of B0VHH0
2y7dD Crystal structure of the 3-keto-5-aminohexanoate cleavage enzyme (kce) from candidatus cloacamonas acidaminovorans (orthorombic form) (see paper)
31% identity, 95% coverage: 9:309/316 of query aligns to 4:278/278 of 2y7dD
2y7gA Crystal structure of the 3-keto-5-aminohexanoate cleavage enzyme (kce) from c. Cloacamonas acidaminovorans in complex with the product acetoacetate (see paper)
31% identity, 95% coverage: 9:309/316 of query aligns to 2:276/276 of 2y7gA
3no5E Crystal structure of a pfam duf849 domain containing protein (reut_a1631) from ralstonia eutropha jmp134 at 1.90 a resolution
29% identity, 95% coverage: 9:308/316 of query aligns to 3:274/275 of 3no5E
3fa5A Crystal structure of a duf849 family protein (pden_3495) from paracoccus denitrificans pd1222 at 1.90 a resolution
30% identity, 95% coverage: 10:309/316 of query aligns to 2:274/276 of 3fa5A
3chvA Crystal structure of a prokaryotic domain of unknown function (duf849) member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a resolution
28% identity, 96% coverage: 9:311/316 of query aligns to 2:276/279 of 3chvA
Sites not aligning to the query:
5zmyA Crystal structure of a cis-epoxysuccinate hydrolase producing d(-)- tartaric acids (see paper)
29% identity, 88% coverage: 31:308/316 of query aligns to 22:280/280 of 5zmyA
Sites not aligning to the query:
5zmuD Crystal structure of a cis-epoxysuccinate hydrolase producing d(-)- tartaric acids (see paper)
29% identity, 88% coverage: 31:308/316 of query aligns to 22:287/287 of 5zmuD
Sites not aligning to the query:
>AZOBR_RS27000 FitnessBrowser__azobra:AZOBR_RS27000
MAAPQKAPQKKVIISCALTGSIHTPTMSDALPVTPDEIVEQGVGAAEAGAAILHLHARDP
RTGQPTPDPAVFMQFLPRLKQSTDAVLNITTGGSLNMTVQERLAAPLQARPEMCSLNMGS
MNFGIFPLADRYQGWKHDWEEPYLRSTDDFIFRNTFRDIAYILEHLGEGCGTRFEFECYD
VGHLYNLAHFVDRGLVKPPFFVQTIFGILGGIGAEQRNLVFMRETADRLFGTDYEWSVLA
AGRHQIPFTTMAAVMGGNVRVGLEDSLYLSKGRLARNSAEQVAKIRRILEELSLEVATPA
EARAMLALKGADQVAF
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory