Comparing AZOBR_RS30770 FitnessBrowser__azobra:AZOBR_RS30770 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
4izuA The e41q mutant of the amidase from nesterenkonia sp. An1 showing the result of michael addition of acrylamide at the active site cysteine
39% identity, 96% coverage: 1:256/268 of query aligns to 2:250/254 of 4izuA
4iztA The e41q mutant of the amidase from nesterenkonia sp. An1 showing covalent addition of the acetamide moiety of fluoroacetamide at the active site cysteine
39% identity, 96% coverage: 1:256/268 of query aligns to 10:259/263 of 4iztA
5nycA A c145a mutant of nesterenkonia an1 amidase bound to propionitrile
39% identity, 96% coverage: 1:256/268 of query aligns to 9:257/261 of 5nycA
4izsA The c145a mutant of the amidase from nesterenkonia sp. An1 in complex with butyramide
39% identity, 96% coverage: 1:256/268 of query aligns to 9:257/261 of 4izsA
5nybA A c145a mutant of nesterenkonia an1 amidase bound to adipamide
39% identity, 96% coverage: 1:256/268 of query aligns to 9:258/262 of 5nybA
5ny7A A c145a mutant of nesterenkonia an1 amidase bound to nicotinamide
39% identity, 96% coverage: 1:256/268 of query aligns to 9:258/262 of 5ny7A
Sites not aligning to the query:
3klcB Crystal structure of hyperthermophilic nitrilase (see paper)
32% identity, 96% coverage: 1:256/268 of query aligns to 1:259/261 of 3klcB
Sites not aligning to the query:
3klcA Crystal structure of hyperthermophilic nitrilase (see paper)
32% identity, 96% coverage: 1:256/268 of query aligns to 1:259/261 of 3klcA
Q9UYV8 Nitrilase; PaNit; EC 3.5.5.1 from Pyrococcus abyssi (strain GE5 / Orsay) (see paper)
32% identity, 96% coverage: 1:256/268 of query aligns to 2:260/262 of Q9UYV8
7ovgA The c146a variant of an amidase from pyrococcus horikoshii with bound acetamide (see paper)
31% identity, 90% coverage: 17:256/268 of query aligns to 19:261/263 of 7ovgA
6ypaB The c146a variant of an amidase from pyrococcus horikoshii with bound glutaramide
31% identity, 90% coverage: 17:256/268 of query aligns to 25:267/269 of 6ypaB
Q9NQR4 Omega-amidase NIT2; Nitrilase homolog 2; EC 3.5.1.3 from Homo sapiens (Human) (see 2 papers)
32% identity, 91% coverage: 20:263/268 of query aligns to 19:276/276 of Q9NQR4
5h8iC Crystal structure of medicago truncatula n-carbamoylputrescine amidohydrolase (mtcpa) in complex with n-(dihydroxymethyl)putrescine (see paper)
29% identity, 93% coverage: 18:266/268 of query aligns to 25:298/301 of 5h8iC
5h8jB Crystal structure of medicago truncatula n-carbamoylputrescine amidohydrolase (mtcpa) in complex with cadaverine (see paper)
29% identity, 93% coverage: 18:266/268 of query aligns to 21:294/297 of 5h8jB
5h8lB Crystal structure of medicago truncatula n-carbamoylputrescine amidohydrolase (mtcpa) c158s mutant in complex with putrescine (see paper)
28% identity, 93% coverage: 18:266/268 of query aligns to 22:295/298 of 5h8lB
Q44185 N-carbamoyl-D-amino acid hydrolase; D-N-alpha-carbamilase; EC 3.5.1.77 from Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter) (see paper)
27% identity, 90% coverage: 21:261/268 of query aligns to 27:303/304 of Q44185
8hpcC Crystal structure of c171a mutant of n-carbamyl-d-amino acid amidohydrolase complexed with n-carbamyl-d-hydroxyphenylglycine
26% identity, 91% coverage: 17:261/268 of query aligns to 26:302/303 of 8hpcC
1uf8A Crystal structure of c171a/v236a mutant of n-carbamyl-d-amino acid amidohydrolase complexed with n-carbamyl-d-phenylalanine
26% identity, 91% coverage: 17:261/268 of query aligns to 26:302/303 of 1uf8A
1uf7A Crystal structure of c171a/v236a mutant of n-carbamyl-d-amino acid amidohydrolase complexed with n-carbamyl-d-valine
26% identity, 91% coverage: 17:261/268 of query aligns to 26:302/303 of 1uf7A
1uf5A Crystal structure of c171a/v236a mutant of n-carbamyl-d-amino acid amidohydrolase complexed with n-carbamyl-d-methionine
26% identity, 91% coverage: 17:261/268 of query aligns to 26:302/303 of 1uf5A
>AZOBR_RS30770 FitnessBrowser__azobra:AZOBR_RS30770
MRLTLFQTDAEPGAPHRNLDRLERAAAEAAERGPALLVGPEMGLTSYDIGAETVRALAEP
VDGPMAARVAEIARRHGIAILYGYPERGADGAVYNAAQLIGSDGQSLLNQRKTHLYGDLD
RGSFAPGGDAFPTAEVDGMRVGVAICYDVEFPELVRRHALAGVDVLLVPTALMTPYEIVA
TTVIPARAFENGIFVAYANRCGREGTLRYCGLSSVAAPDGSVLARAGDGEALLTVDLDAA
LRRVGTHLADRRPDLYGAVSSTPGKGGS
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory