SitesBLAST
Comparing AZOBR_RS31645 FitnessBrowser__azobra:AZOBR_RS31645 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 10 hits to proteins with known functional sites (download)
7w2jD Cryo-em structure of membrane-bound fructose dehydrogenase from gluconobacter japonicus
30% identity, 97% coverage: 13:518/523 of query aligns to 5:536/537 of 7w2jD
- binding fe3-s4 cluster: R200 (≠ I183), C211 (= C194), G213 (≠ Q196), N214 (≠ I197), N215 (≠ G198), C217 (= C200), C221 (= C204), I223 (≠ S206), A225 (= A208), S338 (≠ T323)
- binding flavin-adenine dinucleotide: G9 (= G17), G11 (= G19), D32 (≠ E40), A33 (= A41), Y59 (≠ W63), K97 (= K88), G101 (= G92), T102 (≠ S93), T103 (= T94), H105 (= H96), W106 (= W97), S109 (≠ A100), V249 (= V234), A284 (≠ G269), N285 (= N270), E288 (= E273), K291 (≠ R276), L292 (= L277), N472 (≠ T454), N516 (= N498), S517 (≠ P499), T518 (= T500)
- binding heme c: P209 (≠ G192), I223 (≠ S206)
8jejA Cryo-em structure of na-dithionite reduced membrane-bound fructose dehydrogenase from gluconobacter japonicus
30% identity, 97% coverage: 13:518/523 of query aligns to 8:539/540 of 8jejA
- binding fe3-s4 cluster: R203 (≠ I183), C214 (= C194), C215 (≠ Q195), G216 (≠ Q196), N217 (≠ I197), N218 (≠ G198), N219 (≠ F199), C220 (= C200), C224 (= C204), I226 (≠ S206), M229 (≠ K209), S341 (≠ T323)
- binding flavin-adenine dinucleotide: I11 (≠ V16), G12 (= G17), G14 (= G19), I15 (≠ A20), C16 (≠ G21), D35 (≠ E40), A36 (= A41), G97 (vs. gap), K100 (= K88), G101 (≠ A89), G104 (= G92), T105 (≠ S93), T106 (= T94), H108 (= H96), W109 (= W97), A110 (= A98), S112 (≠ A100), M221 (≠ F201), A250 (= A232), V252 (= V234), A287 (≠ G269), N288 (= N270), E291 (= E273), N475 (≠ T454), H476 (= H455), N519 (= N498), T521 (= T500), M524 (≠ I503)
8grjB Crystal structure of gamma-alpha subunit complex from burkholderia cepacia fad glucose dehydrogenase in complex with gluconolactone
31% identity, 94% coverage: 25:518/523 of query aligns to 15:531/531 of 8grjB
- binding fe3-s4 cluster: C204 (= C194), C205 (≠ Q195), G206 (≠ Q196), N207 (≠ I197), N209 (≠ F199), C210 (= C200), C214 (= C204), P331 (≠ Y320)
- binding flavin-adenine dinucleotide: E30 (= E40), A31 (= A41), Q86 (≠ W85), R89 (≠ K88), T94 (≠ S93), H97 (= H96), W98 (= W97), A99 (= A98), S101 (≠ A100), M211 (≠ F201), V242 (= V234), A277 (≠ G269), N278 (= N270), E281 (= E273), I285 (≠ L277), N467 (≠ T454), N511 (= N498), T513 (= T500)
- binding D-glucono-1,5-lactone: M211 (≠ F201), E333 (≠ G322), H355 (≠ D338), N466 (≠ S453), N467 (≠ T454), H468 (= H455), N511 (= N498)
Sites not aligning to the query:
7qvaA Crystal structure of a bacterial pyranose 2-oxidase in complex with mangiferin (see paper)
24% identity, 98% coverage: 13:523/523 of query aligns to 8:457/457 of 7qvaA
- binding flavin-adenine dinucleotide: V11 (= V16), G12 (= G17), G14 (= G19), P15 (≠ A20), T16 (≠ G21), F36 (≠ K32), E37 (≠ G33), V38 (≠ I34), S97 (vs. gap), G102 (= G92), M103 (≠ S93), H106 (= H96), W107 (= W97), T108 (≠ A98), A110 (= A100), L206 (≠ Q233), V207 (= V234), G241 (≠ A268), A242 (≠ G269), D243 (≠ N270), R246 (≠ E273), L387 (≠ T454), H388 (= H455), N432 (= N498), T434 (= T500)
- binding Mangiferin: K51 (≠ E48), R73 (≠ S70), T108 (≠ A98), M299 (≠ L361), A385 (≠ P452), S386 (= S453), H388 (= H455)
7dveA Crystal structure of fad-dependent c-glycoside oxidase (see paper)
27% identity, 84% coverage: 81:521/523 of query aligns to 96:496/498 of 7dveA
- binding flavin-adenine dinucleotide: S103 (≠ V87), G108 (= G92), M109 (≠ S93), H112 (= H96), W113 (= W97), T114 (≠ A98), A116 (= A100), L221 (≠ N231), V222 (≠ A232), A257 (≠ G269), R261 (≠ E273), L428 (≠ T454), N463 (≠ G488), N473 (= N498), T475 (= T500)
Sites not aligning to the query:
7qfdA Crystal structure of a bacterial pyranose 2-oxidase complex with d- glucose (see paper)
33% identity, 28% coverage: 380:523/523 of query aligns to 311:458/458 of 7qfdA
Sites not aligning to the query:
- binding flavin-adenine dinucleotide: 11, 14, 15, 16, 36, 37, 38, 101, 106, 107, 111, 112, 114, 210, 211, 246, 250
- binding alpha-D-glucopyranose: 77, 112
7qf8A Crystal structure of a bacterial pyranose 2-oxidase from pseudoarthrobacter siccitolerans (see paper)
34% identity, 25% coverage: 392:523/523 of query aligns to 357:492/494 of 7qf8A
Sites not aligning to the query:
- binding flavin-adenine dinucleotide: 11, 12, 14, 15, 16, 37, 38, 114, 119, 120, 124, 125, 127, 227, 261, 262, 263, 266, 331
4mihA Pyranose 2-oxidase from phanerochaete chrysosporium, recombinant h158a mutant (see paper)
27% identity, 26% coverage: 385:518/523 of query aligns to 438:575/576 of 4mihA
Sites not aligning to the query:
- binding flavin-adenine dinucleotide: 22, 23, 24, 43, 44, 136, 137, 138, 141, 142, 146, 147, 149, 270, 310, 314
- binding 3-deoxy-3-fluoro-beta-D-glucopyranose: 413, 417, 421
4migA Pyranose 2-oxidase from phanerochaete chrysosporium, recombinant wild type (see paper)
27% identity, 26% coverage: 385:518/523 of query aligns to 432:569/570 of 4migA
Sites not aligning to the query:
- binding dihydroflavine-adenine dinucleotide: 10, 11, 12, 31, 32, 128, 129, 130, 133, 134, 137, 138, 139, 141, 262, 302, 306
- binding 3-deoxy-3-fluoro-beta-D-glucopyranose: 139, 407, 411, 415
4mifB Pyranose 2-oxidase from phanerochaete chrysosporium, wild type from natural source (see paper)
27% identity, 26% coverage: 385:518/523 of query aligns to 443:580/581 of 4mifB
Sites not aligning to the query:
- binding dihydroflavine-adenine dinucleotide: 10, 11, 12, 31, 32, 138, 142, 143, 146, 147, 148, 149, 150, 271, 312, 313, 316
Query Sequence
>AZOBR_RS31645 FitnessBrowser__azobra:AZOBR_RS31645
MAAKFDLNDDSVVVIVGSGAGGGTLGTQLALKGIKTVILEAGGRHNMEDFQNDEWASFAQ
ISWLDPRTTSGSWRVSRDFPGLPAWIVKAVGGSTVHWAGAALRFQPHEFKTRTAYGEVAG
ANLLDWPITLEELEPWYAKAEDRMGVTRTNGIPGLPGNNNFKVLKAGADKMGYTECHTGN
MAINSEPRDGRGGCQQIGFCFQGCKSGAKWSTLIAEIPKGEETGKLEVRANAQVLKIEHD
AKGKVTGVVYADKDGAIQRQKARIVAVAGNSIESPRLLLNSASSMFPDGLANSSGQVGRN
YMRHMTGSVYGVFEKPVRMYRGTTMAGIIRDEAKNKPDRGFVGGYEMETLSLGLPFMAAF
LDPGAWGREFTSALDGYDHMAGMWLVGEDMPQESNRITLHADKKDKHGMPVPNVHFDDHP
NDVAMRQHAYRQGMALYESVGATRSFPTPPYPSTHNLGTNRMSEKARDGVVNKWGQTHDV
ANLFVSDGSQFTTGGAENPTLTIVALALRQADYIAGQMAKNAI
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory