Comparing AZOBR_RS32390 FitnessBrowser__azobra:AZOBR_RS32390 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 7 hits to proteins with known functional sites (download)
P54955 N-acetylcysteine deacetylase; S-(2-succino)cysteine metabolism operon protein P; EC 3.5.1.- from Bacillus subtilis (strain 168)
36% identity, 96% coverage: 12:393/399 of query aligns to 2:376/380 of P54955
O04373 IAA-amino acid hydrolase ILR1-like 4; jasmonoyl-L-amino acid hydrolase; EC 3.5.1.-; EC 3.5.1.127 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
37% identity, 93% coverage: 24:395/399 of query aligns to 52:425/440 of O04373
P54968 IAA-amino acid hydrolase ILR1; EC 3.5.1.- from Arabidopsis thaliana (Mouse-ear cress) (see paper)
35% identity, 97% coverage: 9:397/399 of query aligns to 40:431/442 of P54968
4ewtA The crystal structure of a putative aminohydrolase from methicillin resistant staphylococcus aureus (see paper)
34% identity, 94% coverage: 6:382/399 of query aligns to 2:377/389 of 4ewtA
6slfA Nalpha-acylglutamine aminoacylase from corynebacterium sp.Releasing human axilla odorants co-crystallised with high affinity inhibitor (see paper)
36% identity, 82% coverage: 19:344/399 of query aligns to 21:344/398 of 6slfA
Sites not aligning to the query:
3ramA Crystal structure of hmra (see paper)
23% identity, 68% coverage: 22:292/399 of query aligns to 20:270/391 of 3ramA
Sites not aligning to the query:
7uoiA Crystallographic structure of dape from enterococcus faecium
28% identity, 24% coverage: 187:283/399 of query aligns to 179:279/383 of 7uoiA
Sites not aligning to the query:
>AZOBR_RS32390 FitnessBrowser__azobra:AZOBR_RS32390
MTIPTNVRLHPAAEALAPEMRQWRHHLHAHPETAFEEHETAAFVADKLRAFGLEVATGLG
RTGLVGTLKGRRPGGRAIALRADMDALHIHETNDFAHRSVNPGRMHACGHDGHTTMLLGA
TKVLADDPDFAGTLHVIFQPAEENEGGAREMVAEGLFERFPVDGVYGMHNWPGLPLGQIA
LRPGPMMGSYDIFEVTVHGKGSHAAMPHLGHDPMTAAGHLLTTLQTIPGRSLHPLDSAVV
STTWITGGDTWNVIPAEVTLRGTVRAFKEGVQDVVEARLRALAEHTAAAFGCTASVRYER
RYPATVNSAAETALCARVAATLVGEENIDHDPMPSMGAEDFAFMLKERPGCYVWLGNGPT
DGGCLLHNPGYDFNDANLAIGASYWVALAKTLLVEEGTR
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory