SitesBLAST
Comparing AZOBR_RS32405 AZOBR_RS32405 ABC transporter to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
1g9xB Characterization of the twinning structure of mj1267, an atp-binding cassette of an abc transporter (see paper)
33% identity, 96% coverage: 5:249/255 of query aligns to 4:253/253 of 1g9xB
1g6hA Crystal structure of the adp conformation of mj1267, an atp- binding cassette of an abc transporter (see paper)
33% identity, 96% coverage: 5:249/255 of query aligns to 4:253/254 of 1g6hA
4u00A Crystal structure of ttha1159 in complex with adp (see paper)
33% identity, 91% coverage: 5:237/255 of query aligns to 2:223/241 of 4u00A
6s8nB Cryo-em structure of lptb2fgc in complex with lipopolysaccharide (see paper)
33% identity, 96% coverage: 6:249/255 of query aligns to 3:235/238 of 6s8nB
6s8gA Cryo-em structure of lptb2fgc in complex with amp-pnp (see paper)
33% identity, 96% coverage: 6:249/255 of query aligns to 3:235/238 of 6s8gA
- binding phosphoaminophosphonic acid-adenylate ester: Y12 (≠ F15), R15 (≠ L18), V17 (≠ A20), N37 (= N40), G38 (= G41), G40 (= G43), K41 (= K44), T42 (= T45), T43 (= T46), Q84 (= Q87), S136 (≠ N150), S138 (= S152), E141 (≠ K155), H194 (= H208)
6mhzA Vanadate trapped cryo-em structure of e.Coli lptb2fg transporter (see paper)
33% identity, 96% coverage: 6:249/255 of query aligns to 3:235/235 of 6mhzA
- binding adp orthovanadate: Y12 (≠ F15), P36 (= P39), N37 (= N40), G38 (= G41), A39 (= A42), G40 (= G43), K41 (= K44), T42 (= T45), T43 (= T46), Q84 (= Q87), S136 (≠ N150), S138 (= S152), G139 (≠ Y153), G140 (= G154), E141 (≠ K155), E162 (= E176), G166 (= G180), H194 (= H208)
6mbnA Lptb e163q in complex with atp (see paper)
32% identity, 96% coverage: 6:249/255 of query aligns to 4:236/241 of 6mbnA
- binding adenosine-5'-triphosphate: Y13 (≠ F15), R16 (≠ L18), V18 (≠ A20), P37 (= P39), N38 (= N40), G39 (= G41), A40 (= A42), G41 (= G43), K42 (= K44), T43 (= T45), T44 (= T46), Q85 (= Q87), H195 (= H208)
6b89A E. Coli lptb in complex with adp and novobiocin (see paper)
33% identity, 95% coverage: 6:248/255 of query aligns to 3:234/234 of 6b89A
- binding adenosine-5'-diphosphate: Y12 (≠ F15), R15 (≠ L18), V17 (≠ A20), N37 (= N40), G38 (= G41), A39 (= A42), G40 (= G43), K41 (= K44), T42 (= T45), T43 (= T46)
- binding magnesium ion: T42 (= T45), Q84 (= Q87)
- binding novobiocin: L71 (≠ P74), H72 (≠ W75), Y81 (≠ R84), P83 (≠ F86), E85 (≠ N88), A86 (≠ L89), S87 (≠ R90), F89 (= F92), F89 (= F92), R90 (≠ P93), R91 (≠ N94), L92 (≠ M95), V101 (≠ F109), Q135 (≠ A149), R149 (= R163)
4p31A Crystal structure of a selenomethionine derivative of e. Coli lptb in complex with adp-magensium (see paper)
33% identity, 95% coverage: 6:248/255 of query aligns to 3:234/234 of 4p31A
- binding adenosine-5'-diphosphate: Y12 (≠ F15), R15 (≠ L18), V17 (≠ A20), N37 (= N40), G38 (= G41), A39 (= A42), G40 (= G43), K41 (= K44), T42 (= T45), T43 (= T46)
- binding magnesium ion: T42 (= T45), Q84 (= Q87)
1ji0A Crystal structure analysis of the abc transporter from thermotoga maritima
31% identity, 98% coverage: 1:250/255 of query aligns to 2:239/240 of 1ji0A
- binding adenosine-5'-triphosphate: Y16 (≠ F15), I19 (≠ L18), A21 (= A20), N41 (= N40), G42 (= G41), A43 (= A42), G44 (= G43), K45 (= K44), T46 (= T45), T47 (= T46), E88 (≠ Q87), D164 (= D175), E165 (= E176)
6b8bA E. Coli lptb in complex with adp and a novobiocin derivative (see paper)
32% identity, 95% coverage: 6:247/255 of query aligns to 3:233/233 of 6b8bA
- binding adenosine-5'-diphosphate: Y12 (≠ F15), R15 (≠ L18), V17 (≠ A20), N37 (= N40), G38 (= G41), A39 (= A42), G40 (= G43), K41 (= K44), T42 (= T45), T43 (= T46)
- binding (3s,5s,7s)-N-{7-[(3-O-carbamoyl-6-deoxy-5-methyl-4-O-methyl-beta-D-gulopyranosyl)oxy]-4-hydroxy-8-methyl-2-oxo-2H-1-benzopyran-3-yl}tricyclo[3.3.1.1~3,7~]decane-1-carboxamide: F89 (= F92), R90 (≠ P93), R91 (≠ N94)
4ymuJ Crystal structure of an amino acid abc transporter complex with arginines and atps (see paper)
29% identity, 91% coverage: 5:237/255 of query aligns to 1:223/240 of 4ymuJ
- binding adenosine-5'-triphosphate: F11 (= F15), L14 (= L18), V16 (≠ A20), S36 (≠ N40), G37 (= G41), S38 (≠ A42), G39 (= G43), K40 (= K44), S41 (≠ T45), T42 (= T46), E51 (≠ T55), E162 (= E176), H194 (= H208)
- binding magnesium ion: S41 (≠ T45), E162 (= E176)
P69874 Spermidine/putrescine import ATP-binding protein PotA; EC 7.6.2.11 from Escherichia coli (strain K12) (see 3 papers)
31% identity, 94% coverage: 5:244/255 of query aligns to 17:242/378 of P69874
- C26 (≠ R14) mutation to A: Lower ATPase activity and transport efficiency.
- F27 (= F15) mutation to L: Lower ATPase activity and transport efficiency.
- F45 (≠ L33) mutation to L: Lower ATPase activity and transport efficiency.
- C54 (≠ A42) mutation to T: Loss of ATPase activity and transport.
- L60 (≠ F48) mutation to F: Lower ATPase activity and transport efficiency.
- L76 (≠ F64) mutation to P: Lower ATPase activity and transport efficiency.
- V135 (= V138) mutation to M: Loss of ATPase activity and transport.
- D172 (= D175) mutation to N: Loss of ATPase activity and transport.
Sites not aligning to the query:
- 276 C→A: Lower ATPase activity and transport efficiency.
- 297 mutation E->K,D: Lower ATPase activity and transport efficiency.; E→Q: Loss of ATPase activity and transport.
P04983 Ribose import ATP-binding protein RbsA; EC 7.5.2.7 from Escherichia coli (strain K12) (see paper)
28% identity, 96% coverage: 5:249/255 of query aligns to 4:239/501 of P04983
- K43 (= K44) mutation to R: Loss of transport.
3c4jA Abc protein artp in complex with atp-gamma-s
28% identity, 91% coverage: 5:235/255 of query aligns to 3:223/242 of 3c4jA
- binding phosphothiophosphoric acid-adenylate ester: F13 (= F15), V18 (≠ A20), P37 (= P39), S38 (≠ N40), G39 (= G41), S40 (≠ A42), G41 (= G43), K42 (= K44), S43 (≠ T45), T44 (= T46), H133 (≠ G145), Y135 (≠ I147), E164 (= E176)
3c41J Abc protein artp in complex with amp-pnp/mg2+
28% identity, 91% coverage: 5:235/255 of query aligns to 3:223/242 of 3c41J
- binding phosphoaminophosphonic acid-adenylate ester: F13 (= F15), V18 (≠ A20), P37 (= P39), S38 (≠ N40), G39 (= G41), S40 (≠ A42), G41 (= G43), K42 (= K44), S43 (≠ T45), T44 (= T46), R47 (≠ N49), H133 (≠ G145), Y135 (≠ I147)
- binding magnesium ion: S43 (≠ T45), D163 (= D175)
2olkA Abc protein artp in complex with adp-beta-s
28% identity, 91% coverage: 5:235/255 of query aligns to 3:223/242 of 2olkA
2oljA Abc protein artp in complex with adp/mg2+
28% identity, 91% coverage: 5:235/255 of query aligns to 3:223/242 of 2oljA
- binding adenosine-5'-diphosphate: F13 (= F15), V18 (≠ A20), S38 (≠ N40), G39 (= G41), S40 (≠ A42), G41 (= G43), K42 (= K44), S43 (≠ T45), T44 (= T46), H133 (≠ G145), Y135 (≠ I147)
A5U7B7 Cell division ATP-binding protein FtsE from Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) (see 2 papers)
34% identity, 83% coverage: 20:231/255 of query aligns to 18:219/229 of A5U7B7