Comparing Ac3H11_1187 FitnessBrowser__acidovorax_3H11:Ac3H11_1187 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
3wr9A Crystal structure of the anaerobic desb-gallate complex (see paper)
25% identity, 69% coverage: 9:109/146 of query aligns to 302:402/416 of 3wr9A
Sites not aligning to the query:
3wkuA Crystal structure of the anaerobic desb-gallate complex (see paper)
25% identity, 69% coverage: 9:109/146 of query aligns to 297:397/407 of 3wkuA
Sites not aligning to the query:
>Ac3H11_1187 FitnessBrowser__acidovorax_3H11:Ac3H11_1187
MSLDKPYLDVPGTTIFDAEQSRKGYWLNQFCMSLMKAENRVRFKANERAYLDEWAMTEEQ
KKAVLARDLNWCIRLGGNIYFLAKIGSTDGKSFQQMAGSMTGMTEEEYRNMMIKGGRSAD
GNRVIGEDGDAQAHRQPQGSAGKKGI
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory