Comparing Ac3H11_2067 FitnessBrowser__acidovorax_3H11:Ac3H11_2067 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
1sz2B Crystal structure of e. Coli glucokinase in complex with glucose (see paper)
42% identity, 93% coverage: 6:306/325 of query aligns to 5:304/320 of 1sz2B
>Ac3H11_2067 FitnessBrowser__acidovorax_3H11:Ac3H11_2067
MHPQRLLADIGGTNIRLAWQASPTGPLNDTRVLPCAQFPTVDAALAAYLQEVGVPTPREA
AFGIANPVTGDAIRMTNHSWSFSQRAVREAFGFERLVVINDFTALALALPLLTPEQLRPV
GGGAAVPGAAIALLGPGTGLGVSGLVFPPGSHLGVPLSGEGGHVTLAAQTQREFDVLAIL
QERYGHVSAERAVCGAGLVDLYHALRRLAQRGGKEISSAAQVTELALQANDPLALEALEL
FCGFLGSVAGNLALTLGARGGVFIGGGMVPRLGAWFDQSPFRARFESKGRFQSYLAGIPC
WVIDPGATPALHGASRALDIAGSDA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory