SitesBLAST
Comparing Ac3H11_2278 FitnessBrowser__acidovorax_3H11:Ac3H11_2278 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
P22033 Methylmalonyl-CoA mutase, mitochondrial; MCM; Methylmalonyl-CoA isomerase; EC 5.4.99.2 from Homo sapiens (Human) (see 27 papers)
65% identity, 97% coverage: 20:721/722 of query aligns to 43:743/750 of P22033
- Q50 (≠ S27) binding
- I69 (≠ V46) to V: in MMAM; likely benign variant; dbSNP:rs115923556
- P86 (= P65) to L: in MMAM; mut0 and mut-; no effect on protein abundance; decreased methylmalonyl-CoA mutase activity; decreased affinity for adenosylcob(III)alamin; alters thermodynamic stability; dbSNP:rs769348060
- G87 (= G66) to E: in MMAM; mut0; dbSNP:rs1554160986
- R93 (= R72) to H: in MMAM; mut0; decreased methylmalonyl-CoA mutase activity; dbSNP:rs121918251
- G94 (= G73) to R: in MMAM; mut0; dbSNP:rs727504022; to V: in MMAM; mut- and mut0; dbSNP:rs535411418
- P95 (= P74) to R: in MMAM; mut0; dbSNP:rs190834116
- YPTM 96:99 (≠ QATM 75:78) binding
- Y100 (= Y79) to C: in MMAM; mut-; no effect on protein abundance; decreased methylmalonyl-CoA mutase activity; decreased affinity for adenosylcob(III)alamin; alters thermodynamic stability; dbSNP:rs864309735
- W105 (= W84) to R: in MMAM; mut0; dbSNP:rs121918249
- TIRQY 106:110 (= TIRQY 85:89) binding
- R108 (= R87) to C: in MMAM; mut0; dbSNP:rs121918257; to G: in MMAM; mut-; to H: in MMAM; mut0; dbSNP:rs483352778
- Q109 (= Q88) to R: in MMAM; mut0; dbSNP:rs1461110052
- G133 (= G112) to R: in MMAM; mut0; decreased protein abundance; decreased methylmalonyl-CoA mutase activity; dbSNP:rs879253828
- A137 (= A116) to V: in MMAM; mut0; dbSNP:rs941483851
- D139 (= D118) to N: in MMAM; unknown pathological significance; dbSNP:rs879253829
- L140 (= L119) to P: in MMAM; decreased protein expression; decreased methylmalonyl-CoA mutase activity
- A141 (= A120) to T: in MMAM; decreased protein expression; dbSNP:rs1554160730
- H143 (= H122) to Y: in MMAM; mut0
- G145 (= G124) to S: in MMAM; mut0
- S148 (= S127) to L: in MMAM; mut0; dbSNP:rs1300547552
- D156 (= D135) to N: in MMAM; mut-
- G158 (= G137) to V: in MMAM; mut0
- G161 (= G140) to R: in MMAM; mut0; decreased protein abundance; decreased methylmalonyl-CoA mutase activity; to V: in MMAM; decreased protein expression
- F174 (= F153) to S: in MMAM; mut0; dbSNP:rs864309733
- M186 (= M165) to V: in MMAM; mut-; dbSNP:rs148331800
- T187 (= T166) to S: in MMAM; mut0; dbSNP:rs879253830
- N189 (= N168) to I: in MMAM; mut-; decreased protein abundance; decreased methylmalonyl-CoA mutase activity; dbSNP:rs200908035; to K: in MMAM; mut-; dbSNP:rs1561959114
- A191 (= A170) to E: in MMAM; mut- and mut0; affects proper folding; reduced protein level; decreased methylmalonyl-CoA mutase activity; dbSNP:rs760782399
- A197 (= A176) to E: in MMAM; mut0
- G203 (≠ A182) to R: in MMAM; mut0; decreased protein abundance; decreased methylmalonyl-CoA mutase activity; dbSNP:rs778702777
- E205 (= E184) natural variant: Missing (in MMAM; mut0; dbSNP:rs879253831)
- G215 (= G194) to C: in MMAM; mut- and mut0; dbSNP:rs121918258; to S: in MMAM; mut0; dbSNP:rs121918258
- TIQ 216:218 (= TIQ 195:197) binding
- Q218 (= Q197) to H: in MMAM; mut0 and mut-; no effect on protein abundance; loss of methylmalonyl-CoA mutase activity; alters thermodynamic stability; dbSNP:rs1446389693
- N219 (= N198) to Y: in MMAM; mut0; no effect on protein abundance; loss of methylmalonyl-CoA mutase activity; dbSNP:rs121918256
- R228 (= R207) binding ; to Q: in MMAM; mut0; dbSNP:rs770810987
- T230 (= T209) to I: in MMAM; mut-; to R: in MMAM; mut0; decreased protein abundance; decreased methylmalonyl-CoA mutase activity; dbSNP:rs879253833
- Y231 (= Y210) to N: in MMAM; mut-; no effect on protein abundance; decreased methylmalonyl-CoA mutase activity; strong decreased affinity for adenosylcob(III)alamin; alters thermodynamic stability; dbSNP:rs864309736
- K255 (= K234) binding
- S262 (= S241) to N: in MMAM; mut0
- H265 (= H244) binding ; to Y: in MMAM; mut-
- E276 (= E255) to D: in MMAM; mut-; unknown pathological significance; dbSNP:rs12175488
- L281 (= L260) to S: in MMAM; mut0; dbSNP:rs796052007
- G284 (= G263) to E: in MMAM; mut0; dbSNP:rs879253835; to R: in MMAM; mut0; dbSNP:rs761477436
- S288 (≠ V267) to P: in MMAM; mut0; decreased protein abundance; decreased methylmalonyl-CoA mutase activity; dbSNP:rs1179778233
- G291 (≠ A270) to E: in MMAM; mut0
- Q293 (≠ A272) to P: in MMAM; mut0
- RLS 304:306 (= RLS 283:285) binding
- L305 (= L284) to S: in MMAM; mut0; decreased protein abundance; decreased methylmalonyl-CoA mutase activity; dbSNP:rs1554160246
- S306 (= S285) to F: in MMAM; mut0; dbSNP:rs1085307929
- W309 (= W288) to G: in MMAM; decreased protein expression
- G312 (= G291) to V: in MMAM; mut0; dbSNP:rs864309734
- Y316 (= Y295) to C: in MMAM; mut-; no effect on protein abundance; decreased methylmalonyl-CoA mutase activity; no decreased affinity for adenosylcob(III)alamin; dbSNP:rs781474200
- A324 (= A303) to T: in MMAM; mut-; dbSNP:rs780387525
- R326 (= R305) to K: in MMAM; unknown pathological significance; dbSNP:rs758577372
- L328 (= L307) to F: in MMAM; mut0; affects proper folding; no effect on protein abundance; loss of methylmalonyl-CoA mutase activity; dbSNP:rs796052002; to P: in MMAM; mut0; dbSNP:rs965316043
- S344 (= S322) to F: in MMAM; mut-; affects proper folding; no effect on protein abundance; loss of methylmalonyl-CoA mutase activity; decreased affinity for adenosylcob(III)alamin
- L346 (≠ M324) natural variant: Missing (in MMAM; mut0)
- L347 (= L325) to R: in MMAM; mut0; dbSNP:rs1026703654
- H350 (= H328) to Y: in MMAM; mut0; dbSNP:rs1407914109
- L358 (= L336) to P: in MMAM; mut0
- N366 (= N344) to S: in MMAM; mut-; no effect on protein abundance; loss of methylmalonyl-CoA mutase activity; decreased affinity for adenosylcob(III)alamin; alters thermodynamic stability; dbSNP:rs864309737
- R369 (= R347) to C: in MMAM; mut0; dbSNP:rs772552898; to H: in MMAM; mut- and mut0; no effect on protein abundance; loss of methylmalonyl-CoA mutase activity; alters thermodynamic stability; dbSNP:rs564069299
- T370 (= T348) to P: in MMAM; mut0; dbSNP:rs368790885
- A377 (= A355) to E: in MMAM; mut0; decreased protein abundance; decreased methylmalonyl-CoA mutase activity; dbSNP:rs121918250
- Q383 (= Q361) to H: in MMAM; mut0; to P: in MMAM; mut0
- H386 (= H364) to N: in MMAM; mut0; dbSNP:rs1554159937; to R: in MMAM; mut0; dbSNP:rs866933356
- T387 (= T365) to I: in MMAM; mut-; no effect on protein abundance; decreased methylmalonyl-CoA mutase activity; decreased affinity for adenosylcob(III)alamin; alters thermodynamic stability
- N388 (= N366) to H: in MMAM; mut0; dbSNP:rs766010704; to K: in MMAM; mut0; decreased protein abundance; decreased methylmalonyl-CoA mutase activity; dbSNP:rs879253840
- S389 (≠ A367) natural variant: Missing (in MMAM; mut0)
- I412 (= I390) natural variant: Missing (in MMAM; mut0)
- P424 (= P402) to L: in MMAM; mut0; decreased protein abundance; decreased methylmalonyl-CoA mutase activity; dbSNP:rs879253842
- G426 (≠ A404) to E: in MMAM; mut-; decreased protein abundance; decreased methylmalonyl-CoA mutase activity; dbSNP:rs533755473; to R: in MMAM; mut-; no effect on protein abundance; decreased methylmalonyl-CoA mutase activity; strong decreased affinity for adenosylcob(III)alamin; alters thermodynamic stability; dbSNP:rs769922244
- G427 (= G405) to D: in MMAM; mut0; dbSNP:rs753288303
- G454 (= G432) to E: in MMAM; mut0
- A499 (≠ P477) to T: in dbSNP:rs2229385
- I505 (= I483) to T: in MMAM; decreased protein expression; decreased methylmalonyl-CoA mutase activity
- Q514 (= Q492) to E: in MMAM; unknown pathological significance; to K: in MMAM; decreased protein expression
- L518 (= L496) to P: in MMAM; mut0; dbSNP:rs864309738
- R532 (≠ A510) to H: in dbSNP:rs1141321
- A535 (≠ D513) to P: in MMAM; mut0; dbSNP:rs760183775
- A552 (≠ S530) to V: in MMAM; unknown pathological significance; dbSNP:rs879253845
- C560 (≠ A538) to Y: in MMAM; mut0; dbSNP:rs1238333040
- T566 (≠ S544) to R: in MMAM; mut0
- F573 (= F551) to S: in MMAM; mut-; affects proper folding; no effect on protein abundance; no effect on methylmalonyl-CoA mutase activity; decreased affinity for adenosylcob(III)alamin; does not alter thermodynamic stability; dbSNP:rs775593146
- Y587 (= Y565) to C: in MMAM; mut-
- I597 (≠ W575) to R: in MMAM; no changed in protein expression; decreased methylmalonyl-CoA mutase activity; dbSNP:rs1554158951
- P615 (= P593) to L: in MMAM; mut0; affects proper folding; reduced strongly protein level; to R: in MMAM; mut0; dbSNP:rs1554158777; to T: in MMAM; mut0; affects proper folding; reduced strongly protein level; loss of methylmalonyl-CoA mutase activity; dbSNP:rs1302409621
- R616 (= R594) to C: in MMAM; mut0; dbSNP:rs765284825
- L617 (≠ V595) to R: in MMAM; mut0; dbSNP:rs1554158775
- K621 (= K599) to N: in MMAM; mut0
- G623 (= G601) to R: in MMAM; mut0; dbSNP:rs121918254
- Q624 (= Q602) to R: in MMAM; no effect on protein abundance; dbSNP:rs768521956
- D625 (= D603) to G: in MMAM; mut0; decreased protein abundance; decreased methylmalonyl-CoA mutase activity; dbSNP:rs879253847; to V: in MMAM; mut0; no effect on protein abundance; decreased methylmalonyl-CoA mutase activity
- G626 (= G604) to C: in MMAM; mut-; dbSNP:rs982110849
- H627 (= H605) binding axial binding residue; to R: in MMAM; mut0; dbSNP:rs372486357
- G630 (= G608) to E: in MMAM; mut0; dbSNP:rs143023066
- V633 (= V611) to G: in MMAM; mut-; no effect on protein abundance; decreased methylmalonyl-CoA mutase activity; decreased affinity for adenosylcob(III)alamin; does not alter thermodynamic stability; dbSNP:rs200055428
- G637 (≠ A615) to E: in MMAM; mut-; to R: in MMAM; mut0; dbSNP:rs781501004
- F638 (= F616) to I: in MMAM; mut0
- D640 (= D618) to Y: in MMAM; mut0; dbSNP:rs865815395
- G642 (= G620) to R: in MMAM; mut-; dbSNP:rs747897332
- G648 (= G626) to D: in MMAM; mut-; no effect on protein abundance; decreased methylmalonyl-CoA mutase activity; strong decreased affinity for adenosylcob(III)alamin; alters thermodynamic stability; dbSNP:rs766721811
- I671 (≠ V649) to V: in dbSNP:rs8589
- L674 (= L652) to F: in MMAM; decreased protein abundance; decreased methylmalonyl-CoA mutase activity; dbSNP:rs1164271240
- H678 (= H656) to R: in MMAM; mut-; dbSNP:rs147094927
- E684 (≠ A662) natural variant: E -> EL (in MMAM; mut-)
- L685 (≠ I663) to R: in MMAM; mut-; dbSNP:rs864309739
- R694 (≠ A672) to L: in MMAM; mut-; decreased protein abundance; loss of methylmalonyl-CoA mutase activity; decreased affinity for adenosylcob(III)alamin; alters thermodynamic stability; to W: in MMAM; mut- and mut0; no effect on protein abundance; loss of methylmalonyl-CoA mutase activity; decreased affinity for adenosylcob(III)alamin; alters thermodynamic stability; dbSNP:rs777758903
- M700 (≠ F678) to K: in MMAM; mut-; no effect on protein abundance; loss of methylmalonyl-CoA mutase activity; decreased affinity for adenosylcob(III)alamin; alters thermodynamic stability; dbSNP:rs140600746
- G703 (= G681) to R: in MMAM; mut0; dbSNP:rs121918255
- G717 (= G695) to V: in MMAM; mut-; no effect on protein abundance; interfers with the binding of the cofactor to the apoenzyme; decreased methylmalonyl-CoA mutase activity; strong decreased affinity for adenosylcob(III)alamin; decreased thermodynamic stability; dbSNP:rs121918252
- G723 (= G701) to D: in MMAM; decreased protein expression; decreased methylmalonyl-CoA mutase activity; dbSNP:rs755077681
Sites not aligning to the query:
- 1:32 modified: transit peptide, Mitochondrion
- 7:750 natural variant: Missing (in MMAM; mut-)
- 152:750 natural variant: Missing (in MMAM; mut0)
- 228:750 natural variant: Missing (in MMAM; mut0)
2xiqA Crystal structure of human methylmalonyl-coa mutase in complex with adenosylcobalamin and malonyl-coa (see paper)
65% identity, 97% coverage: 20:721/722 of query aligns to 8:708/714 of 2xiqA
- active site: Y75 (= Y89), Y229 (= Y243), H230 (= H244), K586 (= K599), D590 (= D603), H592 (= H605)
- binding cobalamin: Y75 (= Y89), F103 (= F117), L105 (= L119), H108 (= H122), A125 (= A139), V192 (= V206), R193 (= R207), Y229 (= Y243), H230 (= H244), E233 (= E247), A234 (= A248), G320 (= G333), W321 (= W334), E357 (= E370), A358 (= A371), G360 (≠ A373), L361 (= L374), Q441 (= Q454), D590 (= D603), G591 (= G604), H592 (= H605), D593 (= D606), R594 (= R607), G595 (= G608), I599 (≠ V612), G635 (= G648), S637 (= S650), L639 (= L652), A640 (= A653), A641 (= A654), G667 (= G680), G668 (= G681), V669 (= V682), F687 (≠ Y700), G688 (= G701), P689 (= P702), G690 (= G703), T691 (= T704)
- binding malonyl-coenzyme a: Y61 (≠ Q75), T63 (= T77), M64 (= M78), F67 (≠ V81), R68 (= R82), T71 (= T85), R73 (= R87), Y75 (= Y89), S100 (= S114), S150 (= S164), T152 (= T166), T181 (= T195), Q183 (= Q197), R193 (= R207), K220 (= K234), N222 (= N236), H230 (= H244), R269 (= R283), S271 (= S285), F273 (= F287), R313 (= R326), A314 (≠ T327), H315 (= H328), Q317 (= Q330), Q348 (= Q361), S349 (= S362)
8dyjB Methylmalonyl-CoA mutase, mitochondrial (see paper)
65% identity, 97% coverage: 20:721/722 of query aligns to 7:707/708 of 8dyjB
- binding adenosine-5'-diphosphate: Y74 (= Y89), A75 (= A90), G76 (= G91), A101 (= A116), A124 (= A139), T151 (= T166), Q182 (= Q197), R192 (= R207), Y228 (= Y243), H229 (= H244), F272 (= F287), Q316 (= Q330), H350 (= H364), N352 (= N366), E356 (= E370), L360 (= L374), P361 (= P375)
- binding cobalamin: Y74 (= Y89), F102 (= F117), L104 (= L119), H107 (= H122), A124 (= A139), G125 (= G140), V191 (= V206), R192 (= R207), Y228 (= Y243), H229 (= H244), E232 (= E247), G319 (= G333), W320 (= W334), E356 (= E370), A357 (= A371), G359 (≠ A373), L360 (= L374), Q440 (= Q454), D589 (= D603), G590 (= G604), H591 (= H605), D592 (= D606), R593 (= R607), G594 (= G608), I598 (≠ V612), G634 (= G648), S636 (= S650), L638 (= L652), A639 (= A653), A640 (= A654), G666 (= G680), G667 (= G681), V668 (= V682), F686 (≠ Y700), G687 (= G701), P688 (= P702), G689 (= G703), T690 (= T704)
8gjuJ Methylmalonyl-CoA mutase, mitochondrial (see paper)
64% identity, 97% coverage: 20:721/722 of query aligns to 8:685/689 of 8gjuJ