Comparing Ac3H11_2284 FitnessBrowser__acidovorax_3H11:Ac3H11_2284 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
3abiA Crystal structure of l-lysine dehydrogenase from hyperthermophilic archaeon pyrococcus horikoshii (see paper)
28% identity, 65% coverage: 10:250/369 of query aligns to 3:238/349 of 3abiA
Sites not aligning to the query:
>Ac3H11_2284 FitnessBrowser__acidovorax_3H11:Ac3H11_2284
MTSTTSTRHTVTILGAGHIGFAMALLLQQAGDYDILMADRDPARLAEVAALGVATRLVGD
DTSLQSAIAGRFAVLNALPFHRAVPVATLCAAAGVHYFDLTEDVASTQAIRALAAKARSV
LMPQCGLAPGFIGIVGNDLARRFDTLHTLRMRVGALPRYPQGALRYNLTWSTEGLINEYC
NPCEAIVDGVRTTVPALEGLETFALDGVEYEAFNTSGGLGTLTETLAGKARQVDYQSIRY
PGHNAILKLLLNDLRLRDRRDLLKDILESAIPTTDQDVIVIFATAAGLRGGRLVQESYSA
RIVGTELAGHRLSAIQLTTAAGICTALDLVAQGRLPQRGFVGQEAVRLGDFLANRFGVAY
AGEGALALA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory