SitesBLAST – Find functional sites

 

SitesBLAST

Comparing Ac3H11_2374 FitnessBrowser__acidovorax_3H11:Ac3H11_2374 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 2 hits to proteins with known functional sites (download)

P70994 2-hydroxymuconate tautomerase; (2Z,4E)-2-hydroxyhexa-2,4-dienedioate keto-enol isomerase; 4-oxalocrotonate tautomerase; 4-OT; EC 5.3.2.6 from Bacillus subtilis (strain 168) (see paper)
33% identity, 83% coverage: 1:60/72 of query aligns to 1:59/62 of P70994

query
sites
P70994
M
 
M
P
|
P
Y
 
Y
I
 
V
N
 
T
I
 
V
Q
 
K
I
 
M
T
 
L
R
 
-
E
 
E
G
 
G
A
x
R
S
 
T
R
 
D
E
 
E
Q
 
Q
K
 
K
A
 
R
Q
 
N
L
 
L
I
 
V
R
 
E
G
 
K
A
 
V
T
 
T
D
 
E
L
 
A
V
 
V
V
 
K
Q
 
E
V
 
T
L
 
T
G
 
G
K
 
A
N
 
S
P
 
E
A
 
E
T
 
K
T
 
I
F
 
V
V
 
V
V
 
F
I
 
I
E
 
E
E
 
E
V
 
M
D
 
R
T
 
K
D
 
D
H
 
H
W
 
Y
G
 
A
I
 
V
A
 
A
G
 
G
E
 
K
T
 
R
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L
T
 
S

2opaA Ywhb binary complex with 2-fluoro-p-hydroxycinnamate
32% identity, 82% coverage: 2:60/72 of query aligns to 1:58/61 of 2opaA

query
sites
2opaA
P
 
P
Y
 
Y
I
 
V
N
 
T
I
 
V
Q
 
K
I
x
M
T
 
L
R
 
-
E
 
E
G
 
G
A
x
R
S
 
T
R
 
D
E
 
E
Q
 
Q
K
 
K
A
 
R
Q
 
N
L
 
L
I
 
V
R
 
E
G
 
K
A
 
V
T
 
T
D
 
E
L
 
A
V
 
V
V
 
K
Q
 
E
V
 
T
L
 
T
G
 
G
K
 
A
N
 
S
P
 
E
A
 
E
T
 
K
T
 
I
F
x
V
V
 
V
V
 
F
I
 
I
E
 
E
E
 
E
V
 
M
D
 
R
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K
D
 
D
H
 
H
W
x
Y
G
 
A
I
 
V
A
 
A
G
 
G
E
 
K
T
 
R
V
 
L
T
 
S

Sites not aligning to the query:

Query Sequence

>Ac3H11_2374 FitnessBrowser__acidovorax_3H11:Ac3H11_2374
MPYINIQITREGASREQKAQLIRGATDLVVQVLGKNPATTFVVIEEVDTDHWGIAGETVT
VLRERARQGGAQ

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory