Comparing Ac3H11_2914 FitnessBrowser__acidovorax_3H11:Ac3H11_2914 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
6q6iA Lysine decarboxylase a from pseudomonas aeruginosa
46% identity, 99% coverage: 3:757/761 of query aligns to 4:748/749 of 6q6iA
2vycA Crystal structure of acid induced arginine decarboxylase from e. Coli (see paper)
37% identity, 96% coverage: 7:739/761 of query aligns to 3:740/755 of 2vycA
P28629 Biodegradative arginine decarboxylase; ADC; EC 4.1.1.19 from Escherichia coli (strain K12) (see paper)
37% identity, 96% coverage: 7:739/761 of query aligns to 3:740/755 of P28629
6q7lA Inducible lysine decarboxylase (see paper)
38% identity, 94% coverage: 24:739/761 of query aligns to 19:695/711 of 6q7lA
3n75A X-ray crystal structure of the escherichia coli inducible lysine decarboxylase ldci (see paper)
38% identity, 94% coverage: 24:739/761 of query aligns to 19:695/711 of 3n75A
5xx1G Crystal structure of arginine decarboxylase (adia) from salmonella typhimurium (see paper)
37% identity, 96% coverage: 7:739/761 of query aligns to 4:720/735 of 5xx1G
1ordA Crystallographic structure of a plp-dependent ornithine decarboxylase from lactobacillus 30a to 3.1 angstroms resolution (see paper)
32% identity, 84% coverage: 98:740/761 of query aligns to 56:701/730 of 1ordA
1c4kA Ornithine decarboxylase mutant (gly121tyr) (see paper)
32% identity, 84% coverage: 98:740/761 of query aligns to 56:699/728 of 1c4kA
>Ac3H11_2914 FitnessBrowser__acidovorax_3H11:Ac3H11_2914
MKFRFPIIIIDEDYRSENTSGLGIRALAQAIETEGFEVVGVTSYGDLSQFAQQQSRASAF
ILSIDDEEFTVGEGLDPIVLSLRNFIGEVRRKNADVPIYVHGETKTSRHLPNDILRELHG
FIHMFEDTPEFVARHIIREAKSYLESVQPPFFKALLDYAEDGSYSWHCPGHSGGVAFLKS
PVGQMYHQFYGENMLRADVCNAVEELGQLLDHNGAIGESERNAARIFNADHCFFVTNGTS
TSNKMVWHHTVAPGDVVVVDRNCHKSILHSIIMTGAIPVFMKPTRNHFGIIGPIPQSEFE
PAAIQAKIKANPLLKGVDAKKVKPRVLTLTQSTYDGVLYNTETIKGMLDGYVDNLHFDEA
WLPHAAFHPFYGSYHAMGKKRTRPKYSVTYATQSIHKLLAGISQASHVLVQDSQTAKLDR
HLFNEAYLMHTSTSPQYSIIASCDVAAAMMEPPGGTALVEESLLEALDFRRAMRQVEEDF
GKNDWWFKVWGPDKLVDEGLGRAEDWIIRSDGKGKKNGSKWHGFGQLADGFNMLDPIKST
IVTPGLNLDGKFDKTGIPASIVTKYLAEHGVVVEKTGLYSFFIMFTIGITKGRWNTLLTA
LQQFKDDYEKNQPMWRILPEFCQQHKRYERMGLRDLCQHVHEMYAKYDIARLTTEMYLSD
LTPAMKPSDAYAHIAHRTTERVEIDNLEGRITVGLVTPYPPGIPLLIPGEVFNKKIVDYL
KFAREFAKLCPGFETDIHGLVEVEDESGQVRYYADCVAGKP
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory