Comparing Ac3H11_3135 FitnessBrowser__acidovorax_3H11:Ac3H11_3135 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
Q58097 (5-formylfuran-3-yl)methyl phosphate transaminase; 4-HFC-P:alanine aminotransferase; EC 2.6.1.108 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
33% identity, 99% coverage: 3:394/394 of query aligns to 2:369/370 of Q58097
5yhvA Crystal structure of an aminotransferase from mycobacterium tuberculosis
36% identity, 97% coverage: 10:393/394 of query aligns to 17:391/394 of 5yhvA
P96847 Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
36% identity, 97% coverage: 10:393/394 of query aligns to 11:385/388 of P96847
5yhvB Crystal structure of an aminotransferase from mycobacterium tuberculosis
36% identity, 97% coverage: 10:393/394 of query aligns to 10:384/387 of 5yhvB
P14909 Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus) (see 3 papers)
31% identity, 93% coverage: 23:390/394 of query aligns to 23:392/402 of P14909
Sites not aligning to the query:
1gdeA Crystal structure of pyrococcus protein a-1 e-form (see paper)
33% identity, 93% coverage: 28:393/394 of query aligns to 19:382/388 of 1gdeA
1gd9A Crystall structure of pyrococcus protein-a1 (see paper)
33% identity, 93% coverage: 28:393/394 of query aligns to 19:382/388 of 1gd9A
P58350 Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) (see paper)
33% identity, 97% coverage: 7:389/394 of query aligns to 15:402/410 of P58350
6f35A Crystal structure of the aspartate aminotranferase from rhizobium meliloti (see paper)
33% identity, 97% coverage: 7:389/394 of query aligns to 5:392/400 of 6f35A
1j32A Aspartate aminotransferase from phormidium lapideum
32% identity, 100% coverage: 1:393/394 of query aligns to 1:384/388 of 1j32A
5wmiA Arabidopsis thaliana prephenate aminotransferase mutant- t84v (see paper)
30% identity, 100% coverage: 1:393/394 of query aligns to 1:396/402 of 5wmiA
1o4sB Crystal structure of aspartate aminotransferase (tm1255) from thermotoga maritima at 1.90 a resolution (see paper)
31% identity, 99% coverage: 4:394/394 of query aligns to 11:383/384 of 1o4sB
5wmhA Arabidopsis thaliana prephenate aminotransferase (see paper)
30% identity, 99% coverage: 3:393/394 of query aligns to 2:396/399 of 5wmhA
5wmlA Arabidopsis thaliana prephenate aminotransferase mutant- k306a (see paper)
30% identity, 100% coverage: 1:393/394 of query aligns to 1:397/404 of 5wmlA
8wkjA The crystal structure of aspartate aminotransferases lpg0070 from legionella pneumophila (see paper)
28% identity, 90% coverage: 36:390/394 of query aligns to 33:387/391 of 8wkjA
1xi9C Alanine aminotransferase from pyrococcus furiosus pfu-1397077-001
31% identity, 93% coverage: 26:393/394 of query aligns to 20:390/393 of 1xi9C
1gc4A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with aspartate (see paper)
30% identity, 99% coverage: 3:393/394 of query aligns to 4:382/382 of 1gc4A
1gc3A Thermus thermophilus aspartate aminotransferase tetra mutant 2 complexed with tryptophan (see paper)
30% identity, 99% coverage: 3:393/394 of query aligns to 4:382/382 of 1gc3A
Q56232 Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) (see 3 papers)
30% identity, 99% coverage: 3:394/394 of query aligns to 4:383/385 of Q56232
6f77A Crystal structure of the prephenate aminotransferase from rhizobium meliloti (see paper)
28% identity, 97% coverage: 9:390/394 of query aligns to 9:392/399 of 6f77A
>Ac3H11_3135 FitnessBrowser__acidovorax_3H11:Ac3H11_3135
MKFSTRAERIEPFYVMEVAKAAQALAREVAGTREPMIFLNIGEPDFTAPPLVQEAAARAV
HSGATQYTNALGLDALRERISSWYQSRFGVNVPARRIVVTAGASAALQLACLALIESGDE
ILMPDPSYPCNRHFVSAAEGKAVLLPTTAAERYQLSADKVRAAWNEKTRGVLLASPSNPT
GTSIAPDELRRIHDVVRSHDGITMIDEIYLGLSYEEEFGHTALAIDDNIISINSFSKYFN
MTGWRLGWMVVPEAMVPVVERLAQNLFICASTVSQYAALACFEAESIAEYERRRAEFKAR
RDFFIPALEKLGLAVPVKPDGAFYAWADCTQAAQRLGVTGSWDFAFELMRRAHIAVTPGR
DFGTFDPERFIRFSTANSMAQLEESVARLRTLLG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory