Comparing Ac3H11_4305 FitnessBrowser__acidovorax_3H11:Ac3H11_4305 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 16 hits to proteins with known functional sites (download)
3p47A Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-cysteine (see paper)
46% identity, 86% coverage: 13:207/227 of query aligns to 75:268/270 of 3p47A
3q1xA Crystal structure of entamoeba histolytica serine acetyltransferase 1 in complex with l-serine (see paper)
46% identity, 86% coverage: 13:207/227 of query aligns to 73:266/267 of 3q1xA
7bw9A Crystal structure of serine acetyltransferase isoform 3 in complex with cysteine from entamoeba histolytica
50% identity, 78% coverage: 25:201/227 of query aligns to 85:252/280 of 7bw9A
4n69A Soybean serine acetyltransferase complexed with serine (see paper)
43% identity, 76% coverage: 30:202/227 of query aligns to 68:230/243 of 4n69A
6wyeA Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) (see paper)
38% identity, 72% coverage: 39:202/227 of query aligns to 78:232/261 of 6wyeA
7ra4A Crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) in complex with serine (see paper)
38% identity, 81% coverage: 20:202/227 of query aligns to 58:230/243 of 7ra4A
4n6bA Soybean serine acetyltransferase complexed with coa (see paper)
42% identity, 76% coverage: 30:202/227 of query aligns to 64:220/233 of 4n6bA
Sites not aligning to the query:
3gvdI Crystal structure of serine acetyltransferase cyse from yersinia pestis
39% identity, 73% coverage: 46:210/227 of query aligns to 87:240/272 of 3gvdI
4hzdA Crystal structure of serine acetyltransferase in complex with coenzyme a from brucella abortus strain s19 (see paper)
34% identity, 78% coverage: 26:202/227 of query aligns to 64:231/250 of 4hzdA
Sites not aligning to the query:
4h7oA Crystal structure of serine acetyltransferase from vibrio cholerae o1 biovar el tor n16961
35% identity, 89% coverage: 16:217/227 of query aligns to 49:242/258 of 4h7oA
1t3dA Crystal structure of serine acetyltransferase from e.Coli at 2.2a (see paper)
39% identity, 73% coverage: 45:210/227 of query aligns to 83:237/262 of 1t3dA
8i04A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with serine (see paper)
38% identity, 73% coverage: 45:210/227 of query aligns to 79:233/258 of 8i04A
8i09A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with butyl gallate (see paper)
38% identity, 73% coverage: 45:210/227 of query aligns to 82:236/246 of 8i09A
8i06A Crystal structure of serine acetyltransferase from salmonella typhimurium complexed with coa (see paper)
38% identity, 73% coverage: 45:210/227 of query aligns to 83:237/244 of 8i06A
1ssqD Serine acetyltransferase- complex with cysteine (see paper)
37% identity, 74% coverage: 34:202/227 of query aligns to 68:227/257 of 1ssqD
1sstA Serine acetyltransferase- complex with coa (see paper)
36% identity, 74% coverage: 34:202/227 of query aligns to 68:220/233 of 1sstA
Sites not aligning to the query:
>Ac3H11_4305 FitnessBrowser__acidovorax_3H11:Ac3H11_4305
VQIGLELRYSARRQALDGADVEAQARRSAQAFAQSLPAIRRLLDSDVLAAYQGDPAARSV
DEVLLCYPGILAMIHHRLAHRLYQLGLPLLARIVAELAHSETGIDIHPGAQIGAGFFIDH
GTGVVIGETAVIGERVRVYQAVTLGAKRFPAGADGHLQKGLPRHPVVQDDVVIYAGATIL
GRVTLGRGAVIGGNVWLTHDVPAGSHVTQASSQESGRFASVLAGAAL
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory