SitesBLAST – Find functional sites

 

SitesBLAST

Comparing Ac3H11_4833 FitnessBrowser__acidovorax_3H11:Ac3H11_4833 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 2 hits to proteins with known functional sites (download)

P70994 2-hydroxymuconate tautomerase; (2Z,4E)-2-hydroxyhexa-2,4-dienedioate keto-enol isomerase; 4-oxalocrotonate tautomerase; 4-OT; EC 5.3.2.6 from Bacillus subtilis (strain 168) (see paper)
43% identity, 90% coverage: 1:56/62 of query aligns to 1:56/62 of P70994

query
sites
P70994
M
 
M
P
|
P
T
 
Y
Y
 
V
H
 
T
V
 
V
E
 
K
M
 
M
M
 
L
E
 
E
G
 
G
R
|
R
T
 
T
V
 
D
E
 
E
Q
 
Q
K
 
K
R
 
R
K
 
N
L
 
L
V
 
V
E
 
E
E
 
K
I
 
V
T
 
T
R
 
E
V
 
A
S
 
V
V
 
K
E
 
E
V
 
T
L
 
T
G
 
G
G
 
A
S
 
S
P
 
E
E
 
E
S
 
K
V
 
I
D
 
V
I
 
V
L
 
F
I
 
I
T
 
E
D
 
E
V
 
M
K
 
R
R
 
K
E
 
D
N
 
H
W
 
Y
A
 
A
T
 
V
G
 
A
G
 
G
K
 
K

2opaA Ywhb binary complex with 2-fluoro-p-hydroxycinnamate
42% identity, 89% coverage: 2:56/62 of query aligns to 1:55/61 of 2opaA

query
sites
2opaA
P
 
P
T
 
Y
Y
 
V
H
 
T
V
 
V
E
 
K
M
|
M
M
x
L
E
 
E
G
 
G
R
|
R
T
 
T
V
 
D
E
 
E
Q
 
Q
K
 
K
R
 
R
K
 
N
L
 
L
V
 
V
E
 
E
E
 
K
I
 
V
T
 
T
R
 
E
V
 
A
S
 
V
V
 
K
E
 
E
V
 
T
L
 
T
G
 
G
G
 
A
S
 
S
P
 
E
E
 
E
S
 
K
V
 
I
D
x
V
I
 
V
L
 
F
I
 
I
T
 
E
D
 
E
V
 
M
K
 
R
R
 
K
E
 
D
N
 
H
W
x
Y
A
 
A
T
 
V
G
 
A
G
 
G
K
 
K

Sites not aligning to the query:

Query Sequence

>Ac3H11_4833 FitnessBrowser__acidovorax_3H11:Ac3H11_4833
MPTYHVEMMEGRTVEQKRKLVEEITRVSVEVLGGSPESVDILITDVKRENWATGGKLWLE
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Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory