Comparing Ac3H11_4900 FitnessBrowser__acidovorax_3H11:Ac3H11_4900 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 2 hits to proteins with known functional sites (download)
4ymtC Crystal structure of an amino acid abc transporter complex with arginines (see paper)
34% identity, 90% coverage: 19:213/217 of query aligns to 21:215/215 of 4ymtC
4ymwC Crystal structure of an amino acid abc transporter with histidines (see paper)
35% identity, 89% coverage: 19:212/217 of query aligns to 21:214/214 of 4ymwC
>Ac3H11_4900 FitnessBrowser__acidovorax_3H11:Ac3H11_4900
MVEFSLWDILRNLLLAARWTVSLSLIAFIGGGLVGLLLLVLRLSKVRGVDRAVGAYVQVF
QGTPLLMQLFLAYFGIALFGIKTSPWTAAAVALTLYTSAYLTEIWRGCVASIPKGQWEAA
QSLAFNFGEQLRHVVLPQALRIAVPPTVGFLVQVIKGTALASVIGFVELTKAGSMISNAT
YKPFLVYACVALLYFVLCFPVSLVAQSLERKLHGNRR
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory