Comparing Ac3H11_559 FitnessBrowser__acidovorax_3H11:Ac3H11_559 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 2 hits to proteins with known functional sites (download)
8oriD Crystal structure of rhizobium etli l-asparaginase reaiv (orthorhombic) (see paper)
38% identity, 96% coverage: 7:329/336 of query aligns to 13:336/341 of 8oriD
7os3AAA L-asparaginase II protein (see paper)
31% identity, 98% coverage: 6:333/336 of query aligns to 11:355/369 of 7os3AAA
>Ac3H11_559 FitnessBrowser__acidovorax_3H11:Ac3H11_559
MGFVPLIEVSRGGLPECQHWGAVAVANRQGQVLAQVGDPYVVTFTRSTIKAFQALPFMQA
GGARAQGWGQGELALLCASHNGEPMHVEQASRMLASVGQDYHALRCGCHRPLFAELGLGT
LPPGFVPDERHNNCSGKHAGFVAHCVREGLPLEDHLDPTHPLQVAIRNHVAQAVGLAPDQ
LAMGIDGCSAPNYAMPLAHLARGYARLAGGAPDTDLHESLTTLADAMVARPELGSGTGRH
DLDFMQVGQGDWVSKTGADGVQVVGSRSRGEAFALKIMDGNMVAQVAAAVEVMDQLGWLD
AGQREALARRRSAHIVNAKGLTVGGRRAVFRLQKAG
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory