Comparing Ac3H11_954 FitnessBrowser__acidovorax_3H11:Ac3H11_954 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 12 hits to proteins with known functional sites (download)
Q9LIR4 Dihydroxy-acid dehydratase, chloroplastic; AthDHAD; DAD; EC 4.2.1.9 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
49% identity, 100% coverage: 1:565/567 of query aligns to 47:607/608 of Q9LIR4
8hs0A The mutant structure of dhad v178w
49% identity, 99% coverage: 4:565/567 of query aligns to 4:569/570 of 8hs0A
P9WKJ5 Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see paper)
48% identity, 98% coverage: 9:563/567 of query aligns to 15:573/575 of P9WKJ5
6ovtA Crystal structure of ilvd from mycobacterium tuberculosis (see paper)
48% identity, 98% coverage: 9:563/567 of query aligns to 2:560/562 of 6ovtA
8ej0A Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mg
36% identity, 92% coverage: 43:565/567 of query aligns to 35:553/568 of 8ej0A
8epzA Crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mn
36% identity, 92% coverage: 43:565/567 of query aligns to 36:554/569 of 8epzA
B5ZZ34 L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum bv. trifolii (strain WSM2304) (see 2 papers)
35% identity, 99% coverage: 6:565/567 of query aligns to 4:564/579 of B5ZZ34
5j85A Ser480ala mutant of l-arabinonate dehydratase (see paper)
35% identity, 99% coverage: 6:565/567 of query aligns to 1:561/576 of 5j85A
Q1JUQ1 L-arabonate dehydratase; L-arabinonate dehydratase; EC 4.2.1.25 from Azospirillum brasilense (see paper)
36% identity, 89% coverage: 28:532/567 of query aligns to 25:529/583 of Q1JUQ1
7m3kA Crystal structure of galactonate dehydratase from brucella melitensis biovar abortus 2308
33% identity, 90% coverage: 28:538/567 of query aligns to 23:541/587 of 7m3kA
Q9A9Z2 D-xylonate dehydratase; XyDHT; Gluconate dehydratase; EC 4.2.1.82; EC 4.2.1.39 from Caulobacter vibrioides (strain ATCC 19089 / CB15) (Caulobacter crescentus) (see 2 papers)
32% identity, 95% coverage: 28:565/567 of query aligns to 34:578/595 of Q9A9Z2
5oynA Crystal structure of d-xylonate dehydratase in holo-form (see paper)
32% identity, 95% coverage: 28:565/567 of query aligns to 28:572/589 of 5oynA
>Ac3H11_954 FitnessBrowser__acidovorax_3H11:Ac3H11_954
MTDSSKPSAPINRRSANITQGKSRAPNRSMYYAMGYEEGDFVKPMVGVANGHSTITPCNS
GLQKLADAAIAGIEEAGGNAQVFGTPTISDGMAMGTEGMKYSLVSREVISDCIETCVGGQ
WMDGVLVVGGCDKNMPGGLMGMLRANVPAIYVYGGTILPGHYQGKDLNIVSVFEAVGENA
AGKLSDFDLKEIEKRAIPGTGSCGGMYTANTMSSAFEALGISLPYSSTMANPHDEKMNSA
KESAKVLIEAIKKDIKPRDIVTKKSIENAVAVIMATGGSTNAVLHFLAIAHAAGVEWSID
DFERVRVKTPVLCDLKPSGKYLAVDLHRAGGIPQVMKVLLNAGLLHGDCLTIEGKTVAEV
LKDVPDQPRADQDVIRPINNPMYAQGHLAILKGNLSPEGAVAKITGLKNPVITGPARVFE
DEQSALEAILAGKIKAGDVMVLRYLGPKGGPGMPEMLAPTGALIGAGLGESVGLITDGRF
SGGTWGMVVGHVAPEAAAGGTIAFVHEGDSITIDARQLLLELNVSEEEIARRRAAWTAPA
PRYTRGVQAKFAFNASSASKGAVLDAY
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory