Comparing BPHYT_RS01065 FitnessBrowser__BFirm:BPHYT_RS01065 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 4 hits to proteins with known functional sites (download)
7w2jD Cryo-em structure of membrane-bound fructose dehydrogenase from gluconobacter japonicus
23% identity, 96% coverage: 9:578/592 of query aligns to 4:532/537 of 7w2jD
8jejA Cryo-em structure of na-dithionite reduced membrane-bound fructose dehydrogenase from gluconobacter japonicus
23% identity, 96% coverage: 9:578/592 of query aligns to 7:535/540 of 8jejA
8grjB Crystal structure of gamma-alpha subunit complex from burkholderia cepacia fad glucose dehydrogenase in complex with gluconolactone
21% identity, 82% coverage: 99:581/592 of query aligns to 91:530/531 of 8grjB
Sites not aligning to the query:
B5WWZ8 Long-chain-alcohol oxidase FAO1; Long-chain fatty alcohol oxidase 1; EC 1.1.3.20 from Lotus japonicus (Lotus corniculatus var. japonicus) (see paper)
31% identity, 14% coverage: 506:585/592 of query aligns to 670:746/749 of B5WWZ8
Sites not aligning to the query:
>BPHYT_RS01065 FitnessBrowser__BFirm:BPHYT_RS01065
MTKSMKPVDVVVIGLGWTGSILSMELASEGLEVVALERGHNRDTSPDYTYPKAVDELKYG
IRGELFRRLSLETVTVRHQVGDTAVPYRQYNAFLLPDNVGGAGVHWNGQLYRPSPEDMKF
RSHNVERYGAGFLPADMTIQDYDVTWNELEPYFDRFEYLNGTSGQAGNLRGKVLSGGNPF
EGPRSRAYPTPPVADQYAAKLFASAARELGYHPFPQPSANCSEPYTNFYGVRLGPCNLCG
FCERFGCFLYSKGAPQTTILPALMRKPNFELRTQSHVVKINVDSTGKRATGVTYIDGAGN
EVFQPADLVILSSFQINNVRLMLLSGIGRPYDPVTGKGVIGKNFAYQMMSSTSVFYDKDV
PINPFIAAGSGGSQIVDEFNSDHFDHGPHGFLGGGYIIGGQTGGRPIQQLAVPHGTPAWG
AQWKRAAKDHYLHTTNVVAHGSVMAYRDAYLDLDPTYRDSLGLPMLRMTFDWHDNEYRMT
RFVTDRALEIVAKMNPKSHSTLMRKPGDHFNVREYQTTHTAGGVITGADPQSSALNRYLQ
SWDVPNLFVMGASAFPQGIGYNPTGLVGALAYFAADAIRTQYLKRPGALVQA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory