SitesBLAST – Find functional sites

 

SitesBLAST

Comparing BPHYT_RS17670 FitnessBrowser__BFirm:BPHYT_RS17670 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

6j2lA Crystal structure of bi-functional enzyme (see paper)
31% identity, 82% coverage: 3:109/131 of query aligns to 98:200/200 of 6j2lA

query
sites
6j2lA
Q
 
K
S
 
G
T
 
T
Q
 
S
T
 
S
T
x
C
S
 
F
S
 
G
D
 
N
S
 
T
A
 
A
S
 
H
T
 
Q
T
 
W
D
 
L
T
 
F
L
 
L
M
 
Y
R
 
Q
L
 
L
A
 
E
A
 
Q
I
 
L
I
 
L
D
 
A
S
 
E
R
 
R
K
 
K
G
 
Y
G
 
A
D
 
D
P
 
P
D
 
E
V
 
T
S
 
S
Y
 
Y
V
 
T
S
 
A
R
 
K
L
 
L
F
 
Y
H
 
A
K
 
S
G
 
G
D
 
T
D
 
K
A
 
R
V
 
I
L
 
A
K
 
Q
K
 
K
I
 
V
G
 
G
E
 
E
E
|
E
A
 
G
T
 
V
E
 
E
V
 
T
V
 
A
L
 
L
A
 
A
A
 
A
K
 
T
D
 
V
A
 
H
R
 
D
H
 
R
G
 
F
G
 
-
A
 
-
P
 
-
K
 
-
A
 
E
L
 
L
V
 
T
G
 
N
E
|
E
V
 
A
A
 
S
D
|
D
L
 
L
W
 
M
F
 
Y
H
 
H
C
 
L
L
 
L
V
 
V
M
 
L
L
 
L
S
 
Q
H
 
D
F
 
Q
D
 
D
L
 
L
S
 
D
P
 
L
A
 
T
D
 
T
V
 
V
L
 
I
A
 
E
E
 
N
L
 
L
E
 
H
R
 
K
R
 
R

Sites not aligning to the query:

Query Sequence

>BPHYT_RS17670 FitnessBrowser__BFirm:BPHYT_RS17670
MTQSTQTTSSDSASTTDTLMRLAAIIDSRKGGDPDVSYVSRLFHKGDDAVLKKIGEEATE
VVLAAKDARHGGAPKALVGEVADLWFHCLVMLSHFDLSPADVLAELERREGMSGIEEKAL
RKSRDREQNGD

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory