Comparing BPHYT_RS20450 FitnessBrowser__BFirm:BPHYT_RS20450 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 20 (the maximum) hits to proteins with known functional sites (download)
1tmxA Crystal structure of hydroxyquinol 1,2-dioxygenase from nocardioides simplex 3e (see paper)
57% identity, 97% coverage: 6:283/287 of query aligns to 12:289/292 of 1tmxA
Q5PXQ6 Hydroxyquinol 1,2-dioxygenase; 1,2-HQD; EC 1.13.11.37 from Nocardioides simplex (Arthrobacter simplex) (see paper)
57% identity, 97% coverage: 6:283/287 of query aligns to 13:290/293 of Q5PXQ6
3n9tA Cryatal structure of hydroxyquinol 1,2-dioxygenase from pseudomonas putida dll-e4
48% identity, 97% coverage: 6:283/287 of query aligns to 5:283/286 of 3n9tA
3th1A Crystal structure of chlorocatechol 1,2-dioxygenase from pseudomonas putida
31% identity, 92% coverage: 22:285/287 of query aligns to 2:246/246 of 3th1A
1dmhA Structure of catechol 1,2-dioxygenase from acinetobacter sp. Adp1 with bound 4-methylcatechol (see paper)
32% identity, 93% coverage: 21:287/287 of query aligns to 24:294/309 of 1dmhA
1dltA Structure of catechol 1,2-dioxygenase from acinetobacter sp. Adp1 with bound catechol (see paper)
32% identity, 93% coverage: 21:287/287 of query aligns to 24:294/309 of 1dltA
1dlmA Structure of catechol 1,2-dioxygenase from acinetobacter calcoaceticus native data (see paper)
32% identity, 93% coverage: 21:287/287 of query aligns to 24:294/309 of 1dlmA
P07773 Catechol 1,2-dioxygenase; 1,2-CTD; EC 1.13.11.1 from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) (see paper)
32% identity, 93% coverage: 21:287/287 of query aligns to 26:296/311 of P07773
3i51A Crystal structure determination of catechol 1,2-dioxygenase from rhodococcus opacus 1cp in complex with 4,5-dichlorocatechol (see paper)
30% identity, 93% coverage: 18:284/287 of query aligns to 3:254/256 of 3i51A
3i4yA Crystal structure determination of catechol 1,2-dioxygenase from rhodococcus opacus 1cp in complex with 3,5-dichlorocatechol (see paper)
30% identity, 93% coverage: 18:284/287 of query aligns to 3:254/256 of 3i4yA
3i4vA Crystal structure determination of catechol 1,2-dioxygenase from rhodococcus opacus 1cp in complex with 3-chlorocatechol (see paper)
30% identity, 93% coverage: 18:284/287 of query aligns to 3:254/256 of 3i4vA
3hjsA Crystal structure of catechol 1,2-dioxygenase from rhodococcus opacus 1cp in complex with 4-methylcatechol (see paper)
30% identity, 93% coverage: 18:284/287 of query aligns to 3:254/256 of 3hjsA
3hjqA Crystal structure of catechol 1,2-dioxygenase from rhodococcus opacus 1cp in complex with 3-methylcatechol (see paper)
30% identity, 93% coverage: 18:284/287 of query aligns to 3:254/256 of 3hjqA
3hhyA Crystal structure determination of catechol 1,2-dioxygenase from rhodococcus opacus 1cp in complex with catechol (see paper)
30% identity, 93% coverage: 18:284/287 of query aligns to 3:254/256 of 3hhyA
3hhxA Crystal structure determination of catechol 1,2-dioxygenase from rhodococcus opacus 1cp in complex with pyrogallol (see paper)
30% identity, 93% coverage: 18:284/287 of query aligns to 3:254/256 of 3hhxA
3hgiA Crystal structure of catechol 1,2-dioxygenase from the gram-positive rhodococcus opacus 1cp (see paper)
30% identity, 93% coverage: 18:284/287 of query aligns to 5:256/258 of 3hgiA
3hj8A Crystal structure determination of catechol 1,2-dioxygenase from rhodococcus opacus 1cp in complex with 4-chlorocatechol (see paper)
30% identity, 93% coverage: 18:284/287 of query aligns to 4:255/257 of 3hj8A
2boyA Crystal structure of 3-chlorocatechol 1,2-dioxygenase from rhodococcus opacus 1cp (see paper)
30% identity, 85% coverage: 23:265/287 of query aligns to 3:240/253 of 2boyA
5umhB Crystal structure of catechol 1,2-dioxygenase protein from burkholderia multivorans
31% identity, 96% coverage: 9:283/287 of query aligns to 13:289/310 of 5umhB
2azqA Crystal structure of catechol 1,2-dioxygenase from pseudomonas arvilla c-1 (see paper)
31% identity, 92% coverage: 21:284/287 of query aligns to 24:289/309 of 2azqA
>BPHYT_RS20450 FitnessBrowser__BFirm:BPHYT_RS20450
MRNLDENTITEAVLARHAHSGDERLKTIVTSLVRHLHDFAREVNLTESEWEQGIRFLTDV
GLITDDKRQEFILLSDTLGLSMLVTAMANRKPPGCTEATVFGPFFVEGAPAYRNGDDVSN
GARGEPCFVSGTVKGADGEAVANARIEVWQADADGFYDVQHAGDDTHRARGVLHSLADGR
YHFRSIVAEPYPIPHDGPVGRMLAALGRHPWRPAHLHFMITAPGYERLVTHVFREGDQYL
DSDAVFGVRSSLVAQWKHHEAGTAPDGTSMTTPFSTLEFDFVLNRSV
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory