Comparing BPHYT_RS23025 FitnessBrowser__BFirm:BPHYT_RS23025 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
7w2jD Cryo-em structure of membrane-bound fructose dehydrogenase from gluconobacter japonicus
26% identity, 96% coverage: 10:578/592 of query aligns to 4:532/537 of 7w2jD
8jejA Cryo-em structure of na-dithionite reduced membrane-bound fructose dehydrogenase from gluconobacter japonicus
26% identity, 96% coverage: 10:578/592 of query aligns to 7:535/540 of 8jejA
>BPHYT_RS23025 FitnessBrowser__BFirm:BPHYT_RS23025
MSTQTKPHVDAVIVGFGWTGAILAKELTEAGLKVVALERGEYRDTYPDGAYPNTIDELTY
NVRKKLFLDLSKTTVSIRHAPNDTALPYRQLAAFLPGEGVGGAGLHWSGVHFRITPEELR
LKSHYEERYGKRFIPEGMTIQDYGVSYDELEPHFDFAEKVFGTSGQAYKVNGKVVGDGNI
YEAPRSDNFPLAAQLNTYSAERFGKAARELGLNPYRLPSANTSGPYTNPYGVQMGPCNFC
GFCSGYACYMYSKASPNLNILPALKQSPNFELRSRCHVLRVELDDTKKRAKGVTYVDPAG
NEVFQPADLVIVAAFQYHNVHLLLLSGIGKPYDPISGEGVVGRNFAYQNLSTITAFFDKD
TFTNPFIGAGGNGVAVDDFNADNFDHGPLGFVGGSPLWVNQAGAKPISGIATPAGTPNWG
ADWKKSVKDHYAHTISMDAHGSNMSYRDVFLDLDPTYRDSYGQPLLRMTFDWKDNDIKMA
RYVTGQMQKIAQQMGPKSINVYTREFGAHFDSRRYQTTHLVGGAVMGTDPKTSVLNRYLQ
SWDVHNVFVMGASAFPQGIGYNPTGLVAALAYWSARAIRTQYLKNPGPLVSV
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory