SitesBLAST
Comparing BPHYT_RS24020 FitnessBrowser__BFirm:BPHYT_RS24020 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
P21213 Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Rattus norvegicus (Rat) (see paper)
37% identity, 85% coverage: 24:492/549 of query aligns to 136:610/657 of P21213
- S254 (vs. gap) mutation to A: Complete loss of activity.
1gkmA Histidine ammonia-lyase (hal) from pseudomonas putida inhibited with l-cysteine (see paper)
39% identity, 88% coverage: 10:490/549 of query aligns to 10:491/507 of 1gkmA
- active site: Y53 (= Y52), G60 (= G59), H83 (= H82), N193 (= N191), Y278 (≠ L274), R281 (= R277), F327 (≠ A325), E412 (= E410)
- binding cysteine: G142 (vs. gap), L144 (= L142), L189 (= L187), N193 (= N191), F327 (≠ A325)
P21310 Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 4 papers)
38% identity, 88% coverage: 10:490/549 of query aligns to 11:494/510 of P21310
- S144 (vs. gap) modified: 2,3-didehydroalanine (Ser); mutation S->A,T: Complete loss of activity.; mutation to C: No effect.
Sites not aligning to the query:
- 1 modified: Initiator methionine, Removed
Q20502 Histidine ammonia-lyase; Histidase; EC 4.3.1.3 from Caenorhabditis elegans (see paper)
36% identity, 85% coverage: 24:491/549 of query aligns to 152:625/677 of Q20502
- D536 (= D401) mutation to N: In am130; causes strong resistance to nickel and zinc toxicity.
2rjsA Sgtam bound to substrate mimic (see paper)
35% identity, 84% coverage: 24:483/549 of query aligns to 24:502/526 of 2rjsA
- active site: Y52 (= Y52), G59 (= G59), H82 (= H82), N192 (= N191), Y295 (≠ L274), R298 (= R277), F343 (≠ A325), Q429 (≠ E410)
- binding (3R)-3-amino-2,2-difluoro-3-(4-methoxyphenyl)propanoic acid: Y52 (= Y52), Y58 (≠ V58), G59 (= G59), H82 (= H82), G141 (= G140), L143 (= L142), N192 (= N191), Y295 (≠ L274), R298 (= R277), N328 (= N307), F343 (≠ A325), N425 (≠ S406), Q429 (≠ E410)
2rjrA Substrate mimic bound to sgtam (see paper)
35% identity, 84% coverage: 24:483/549 of query aligns to 24:502/526 of 2rjrA
- active site: Y52 (= Y52), G59 (= G59), H82 (= H82), N192 (= N191), Y295 (≠ L274), R298 (= R277), F343 (≠ A325), Q429 (≠ E410)
- binding (2S,3S)-3-(4-fluorophenyl)-2,3-dihydroxypropanoic acid: Y52 (= Y52), G59 (= G59), H82 (= H82), G141 (= G140), L143 (= L142), L188 (= L187), N192 (= N191), N328 (= N307), F343 (≠ A325), Q429 (≠ E410)
2qveA Crystal structure of sgtam bound to mechanism based inhibitor (see paper)
35% identity, 84% coverage: 24:483/549 of query aligns to 24:502/526 of 2qveA
- active site: Y52 (= Y52), G59 (= G59), H82 (= H82), N192 (= N191), Y295 (≠ L274), R298 (= R277), F343 (≠ A325), Q429 (≠ E410)
- binding (3R)-3-amino-2,2-difluoro-3-(4-hydroxyphenyl)propanoic acid: Y52 (= Y52), G59 (= G59), H82 (= H82), G141 (= G140), L143 (= L142), N192 (= N191), Y295 (≠ L274), R298 (= R277), N328 (= N307), F343 (≠ A325), Q429 (≠ E410)
Q8GMG0 MIO-dependent tyrosine 2,3-aminomutase; Tyrosine ammonia-lyase; EC 5.4.3.6; EC 4.3.1.23 from Streptomyces globisporus (see 3 papers)
34% identity, 84% coverage: 24:483/549 of query aligns to 35:515/539 of Q8GMG0
- Y63 (= Y52) active site, Proton donor/acceptor; mutation to F: Complete loss of activity. It does not affect the over-all structure of the enzyme.
- E71 (≠ A60) mutation to A: Despite a decrease in activity, it shows lyase activity over time and still produced some amount of beta-tyrosine.
- H93 (= H82) binding ; mutation to F: Complete loss of activity.
- A152 (≠ Y141) modified: Crosslink with 154, 5-imidazolinone (Ala-Gly)
- S153 (vs. gap) modified: 2,3-didehydroalanine (Ser)
- G154 (vs. gap) modified: Crosslink with 152, 5-imidazolinone (Ala-Gly)
- N205 (= N191) binding
- Y303 (vs. gap) mutation to A: Despite a decrease in activity, it shows lyase activity over time and still produced some amount of beta-tyrosine.
- R311 (= R277) binding
- Y415 (= Y382) mutation to V: Complete loss of activity.
3kdzA X-ray crystal structure of a tyrosine aminomutase mutant construct with bound ligand (see paper)
34% identity, 84% coverage: 24:483/549 of query aligns to 25:503/527 of 3kdzA
- active site: F53 (≠ Y52), G60 (= G59), H83 (= H82), N193 (= N191), Y296 (≠ L274), R299 (= R277), F344 (≠ A325), Q430 (≠ E410)
- binding tyrosine: F53 (≠ Y52), Y59 (≠ V58), G60 (= G59), H83 (= H82), G142 (= G140), L144 (= L142), L189 (= L187), N193 (= N191), Y296 (≠ L274), R299 (= R277), N329 (= N307), F344 (≠ A325), N426 (≠ S406), Q430 (≠ E410)
3unvA Pantoea agglomerans phenylalanine aminomutase (see paper)
30% identity, 87% coverage: 4:480/549 of query aligns to 4:498/514 of 3unvA