SitesBLAST – Find functional sites

 

SitesBLAST

Comparing BPHYT_RS27205 FitnessBrowser__BFirm:BPHYT_RS27205 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

4dlfA Crystal structure of an amidohydrolase (cog3618) from burkholderia multivorans (target efi-500235) with bound zn, space group p3221
33% identity, 96% coverage: 2:280/290 of query aligns to 1:286/287 of 4dlfA

query
sites
4dlfA
T
 
A
L
 
L
R
 
R
I
 
I
D
 
D
A
 
S
H
|
H
Q
 
Q
H
|
H
F
 
F
W
 
W
Q
 
R
I
 
Y
A
 
R
D
 
A
R
 
A
E
 
D
G
 
Y
Y
 
P
W
 
W
P
 
I
P
 
G
H
 
A
T
 
G
L
 
M
D
 
G
A
 
V
I
 
L
Y
 
A
R
 
R
D
 
D
F
 
Y
G
 
L
A
 
P
Q
 
D
D
 
A
L
 
L
E
x
H
P
 
P
I
 
L
L
 
M
A
x
H
R
 
A
S
 
Q
N
 
A
V
 
L
Q
 
G
R
 
A
T
 
S
V
 
I
L
 
A
V
 
V
Q
 
Q
S
 
A
L
 
R
P
 
A
T
 
G
P
 
R
E
 
D
D
 
E
T
 
T
R
 
A
Y
 
F
L
 
L
L
 
L
D
 
E
I
 
L
A
 
A
C
|
C
A
x
D
S
 
E
S
 
A
V
 
R
V
 
I
A
 
A
A
 
A
V
 
V
V
 
V
G
 
G
W
 
W
V
 
E
D
 
D
L
 
L
K
 
R
S
 
A
A
 
P
G
 
Q
A
 
L
P
 
A
A
 
E
S
 
R
L
 
V
A
 
A
M
 
E
L
 
W
A
 
-
R
 
R
Q
 
G
P
 
T
K
 
K
F
 
L
R
 
R
G
 
G
V
 
F
R
 
R
P
 
H
M
 
Q
L
 
L
Q
 
Q
D
 
D
-
 
E
L
 
A
D
 
D
D
 
V
D
 
R
G
 
A
W
 
F
I
 
V
D
 
D
D
 
D
P
 
A
M
 
D
L
 
F
E
 
A
P
 
R
A
 
G
V
 
V
E
 
A
A
 
W
M
 
L
F
 
Q
E
 
A
H
 
N
D
 
D
L
 
Y
S
 
V
F
 
Y
D
 
D
A
 
V
L
 
L
V
 
V
T
 
F
P
 
E
R
 
R
H
 
Q
L
 
L
H
 
P
A
 
D
L
 
V
L
 
Q
A
 
A
F
 
F
A
 
C
R
 
A
R
 
R
Y
 
H
P
 
D
R
 
A
L
 
H
R
 
W
I
 
L
V
 
V
I
 
L
D
 
D
H
|
H
A
 
A
A
 
G
K
 
K
P
 
P
P
 
A
I
 
L
A
 
A
S
 
E
G
 
F
R
 
D
S
 
R
E
 
D
P
 
D
-
 
T
-
 
A
-
 
L
-
 
A
-
 
R
W
 
W
H
 
R
V
 
A
A
 
A
M
 
L
S
 
R
R
 
E
L
 
L
A
 
A
E
 
A
L
 
L
P
 
P
N
 
H
V
 
V
H
 
V
C
 
C
K
 
K
L
 
L
S
 
S
G
 
G
L
 
L
W
 
V
T
 
T
E
 
E
A
 
A
G
 
D
-
 
W
-
 
R
-
 
R
-
 
G
-
 
L
P
 
R
H
 
A
P
 
S
D
 
D
L
 
L
T
 
R
L
 
H
V
 
I
E
 
E
P
 
Q
Y
 
C
V
 
L
R
 
D
A
 
A
V
 
A
C
 
L
E
 
D
W
 
A
F
 
F
G
 
G
A
 
P
S
 
Q
R
 
R
L
 
L
M
 
M
W
 
F
G
 
G
S
 
S
D
|
D
W
 
W
P
 
P
V
 
V
S
 
C
R
 
L
L
 
L
A
 
A
G
 
A
H
 
S
F
 
Y
G
 
D
D
 
E
Y
 
V
G
 
A
D
 
S
W
 
L
L
 
V
A
 
-
W
 
-
C
 
-
E
 
E
Q
 
R
C
 
W
C
 
A
D
 
E
R
 
S
F
 
R
L
 
L
G
 
S
P
 
A
D
 
A
A
 
E
H
 
R
A
 
S
S
 
A
V
 
L
F
 
W
G
 
G
G
 
G
N
 
T
A
 
A
C
 
A
H
 
R
F
 
C
Y
 
Y
R
 
A
I
 
L

Query Sequence

>BPHYT_RS27205 FitnessBrowser__BFirm:BPHYT_RS27205
MTLRIDAHQHFWQIADREGYWPPHTLDAIYRDFGAQDLEPILARSNVQRTVLVQSLPTPE
DTRYLLDIACASSVVAAVVGWVDLKSAGAPASLAMLARQPKFRGVRPMLQDLDDDGWIDD
PMLEPAVEAMFEHDLSFDALVTPRHLHALLAFARRYPRLRIVIDHAAKPPIASGRSEPWH
VAMSRLAELPNVHCKLSGLWTEAGPHPDLTLVEPYVRAVCEWFGASRLMWGSDWPVSRLA
GHFGDYGDWLAWCEQCCDRFLGPDAHASVFGGNACHFYRIDHPSDDRQAQ

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory