Comparing BPHYT_RS27410 FitnessBrowser__BFirm:BPHYT_RS27410 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 7 hits to proteins with known functional sites (download)
P54955 N-acetylcysteine deacetylase; S-(2-succino)cysteine metabolism operon protein P; EC 3.5.1.- from Bacillus subtilis (strain 168)
38% identity, 94% coverage: 20:393/396 of query aligns to 12:378/380 of P54955
O04373 IAA-amino acid hydrolase ILR1-like 4; jasmonoyl-L-amino acid hydrolase; EC 3.5.1.-; EC 3.5.1.127 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
36% identity, 94% coverage: 21:391/396 of query aligns to 51:423/440 of O04373
P54968 IAA-amino acid hydrolase ILR1; EC 3.5.1.- from Arabidopsis thaliana (Mouse-ear cress) (see paper)
36% identity, 94% coverage: 18:391/396 of query aligns to 51:427/442 of P54968
6slfA Nalpha-acylglutamine aminoacylase from corynebacterium sp.Releasing human axilla odorants co-crystallised with high affinity inhibitor (see paper)
36% identity, 91% coverage: 10:369/396 of query aligns to 11:374/398 of 6slfA
4ewtA The crystal structure of a putative aminohydrolase from methicillin resistant staphylococcus aureus (see paper)
29% identity, 97% coverage: 10:392/396 of query aligns to 8:389/389 of 4ewtA
3ramA Crystal structure of hmra (see paper)
22% identity, 79% coverage: 11:321/396 of query aligns to 11:311/391 of 3ramA
Sites not aligning to the query:
7t1qA Crystal structure of the succinyl-diaminopimelate desuccinylase (dape) from acinetobacter baumannii in complex with succinic acid
26% identity, 46% coverage: 113:295/396 of query aligns to 108:287/377 of 7t1qA
Sites not aligning to the query:
>BPHYT_RS27410 FitnessBrowser__BFirm:BPHYT_RS27410
METADIPETSLTAHQPHWAKLRRDLHAHPELRFEEHRTADVVARELEELGYTVSRGLGGT
GVVASLPGANPDWGIVLRADMDALPIHEANDFTHASCTHGIMHACGHDGHTVMLLGAARI
LKGMPQLPGSVHFVFQPGEEGGAGARKMIDEGLFEHYPTEAVFGMHNWPGLPGGHFGLRV
GPIMAAGSRFKITVTGKGAHAAQPHLGLDPIPLACSMVLHCQTIAARHKDPVDPAVISVC
MIHAGDTDNVIPDSAELRGTIRTLSSELQQKLQRDIQLMCEGLAAAHGAQVEVTFFQYYP
ATINTRAETQLCEAVIRETFGDERTHADVPANMTSEDFGFMLEERPGTYVLIGNAHAGTA
APGLHNPKYDFNDEIIPAGVQYWITLARQYFQTRAD
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory