Comparing BPHYT_RS28220 FitnessBrowser__BFirm:BPHYT_RS28220 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
4dlfA Crystal structure of an amidohydrolase (cog3618) from burkholderia multivorans (target efi-500235) with bound zn, space group p3221
29% identity, 99% coverage: 4:297/297 of query aligns to 4:286/287 of 4dlfA
>BPHYT_RS28220 FitnessBrowser__BFirm:BPHYT_RS28220
MQVVDSHIHLWDLKTHRYPWLENPGVSFVGDARDLKHDYLLDDLLGEAGDIDVLKLVHVE
ANHDPAAPVEETRWLQAIADRKESCGMPNAIVAAVDLSAPNAPAVLEAHASFANTRGVRQ
ILNVHENKLFDYVGRHLMRERQWREHFALLRRYGMSFDLQLYPSQMEEAAALARAHGDTQ
FVINHAGMFVDRGSVAGYRAWREGMRLLADCPNIAVKISGLAMFDHRWTVESLRPYVLET
IDTFGVERAMFASNFPVDRLFGSYADLWHAYASIVEVASVAEKEALFCRNAERCYRI
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory