SitesBLAST
Comparing BPHYT_RS29875 BPHYT_RS29875 betaine-aldehyde dehydrogenase to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 20 (the maximum) hits to proteins with known functional sites (download)
5gtlA NADPH complex structure of aldehyde dehydrogenase from bacillus cereus
48% identity, 97% coverage: 12:481/483 of query aligns to 19:490/491 of 5gtlA
- active site: N165 (= N156), K188 (= K179), E263 (= E254), C297 (= C288), E394 (= E385), E471 (= E462)
- binding nadph dihydro-nicotinamide-adenine-dinucleotide phosphate: I161 (= I152), I162 (≠ V153), P163 (= P154), W164 (= W155), N165 (= N156), K188 (= K179), A190 (= A181), E191 (= E182), Q192 (≠ I183), G219 (= G210), F220 (≠ K211), G221 (= G212), G225 (= G216), A226 (≠ D217), V229 (= V220), F239 (= F230), G241 (= G232), S242 (= S233), T245 (≠ V236), Y248 (≠ G239), E263 (= E254), L264 (= L255), G265 (= G256), C297 (= C288), Q344 (= Q335), R347 (≠ T338), E394 (= E385), F396 (= F387)
5gtkA NAD+ complex structure of aldehyde dehydrogenase from bacillus cereus
48% identity, 97% coverage: 12:481/483 of query aligns to 19:490/491 of 5gtkA
- active site: N165 (= N156), K188 (= K179), E263 (= E254), C297 (= C288), E394 (= E385), E471 (= E462)
- binding nicotinamide-adenine-dinucleotide: I161 (= I152), I162 (≠ V153), P163 (= P154), W164 (= W155), N165 (= N156), K188 (= K179), A190 (= A181), E191 (= E182), G221 (= G212), G225 (= G216), A226 (≠ D217), V229 (= V220), F239 (= F230), T240 (= T231), G241 (= G232), S242 (= S233), T245 (≠ V236), Y248 (≠ G239), E263 (= E254), L264 (= L255), C297 (= C288), Q344 (= Q335), R347 (≠ T338), E394 (= E385), F396 (= F387)
O14293 Putative aldehyde dehydrogenase-like protein C9E9.09c; EC 1.2.1.- from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
46% identity, 97% coverage: 12:481/483 of query aligns to 25:497/503 of O14293
- S248 (= S233) modified: Phosphoserine
Sites not aligning to the query:
- 501 modified: Phosphoserine
Q63639 Retinal dehydrogenase 2; RALDH 2; RalDH2; Aldehyde dehydrogenase family 1 member A2; Retinaldehyde-specific dehydrogenase type 2; RALDH(II); EC 1.2.1.36 from Rattus norvegicus (Rat) (see paper)
48% identity, 94% coverage: 31:483/483 of query aligns to 59:515/518 of Q63639
6b5hA Aldh1a2 liganded with NAD and 1-(4-cyanophenyl)-n-(3-fluorophenyl)-3- [4-(methylsulfonyl)phenyl]-1h-pyrazole-4-carboxamide (compound cm121) (see paper)
48% identity, 94% coverage: 31:483/483 of query aligns to 33:489/492 of 6b5hA
- active site: N161 (= N156), E260 (= E254), C294 (= C288), E468 (= E462)
- binding 1-(4-cyanophenyl)-N-(3-fluorophenyl)-3-[4-(methylsulfonyl)phenyl]-1H-pyrazole-4-carboxamide: V112 (≠ Q107), G116 (≠ A111), F162 (= F157), L165 (≠ M160), W169 (= W164), Q284 (≠ S278), F288 (= F282), C293 (≠ V287), C294 (= C288), T295 (≠ S289), N449 (≠ G443), L451 (≠ T445), N452 (≠ D446), A453 (≠ V447), F457 (≠ W451)
- binding nicotinamide-adenine-dinucleotide: I157 (= I152), I158 (≠ V153), P159 (= P154), W160 (= W155), N161 (= N156), K184 (= K179), A186 (= A181), E187 (= E182), G217 (= G212), P218 (≠ R213), G221 (= G216), A222 (≠ D217), F235 (= F230), T236 (= T231), G237 (= G232), S238 (= S233), V241 (= V236), I245 (≠ L241), E260 (= E254), L261 (= L255), G262 (= G256), C294 (= C288), E391 (= E385), F393 (= F387), F457 (≠ W451)
6b5gA Aldh1a2 liganded with NAD and (3-ethoxythiophen-2-yl){4-[4-nitro-3- (pyrrolidin-1-yl)phenyl]piperazin-1-yl}methanone (compound 6-118) (see paper)
48% identity, 94% coverage: 31:483/483 of query aligns to 33:489/492 of 6b5gA
- active site: N161 (= N156), E260 (= E254), C294 (= C288), E468 (= E462)
- binding (3-ethoxythiophen-2-yl){4-[4-nitro-3-(pyrrolidin-1-yl)phenyl]piperazin-1-yl}methanone: V112 (≠ Q107), F162 (= F157), L165 (≠ M160), M166 (≠ I161), W169 (= W164), F288 (= F282), C293 (≠ V287), C294 (= C288), T295 (≠ S289), N449 (≠ G443), L451 (≠ T445)
- binding nicotinamide-adenine-dinucleotide: I157 (= I152), I158 (≠ V153), P159 (= P154), W160 (= W155), N161 (= N156), M166 (≠ I161), K184 (= K179), E187 (= E182), G217 (= G212), P218 (≠ R213), G221 (= G216), A222 (≠ D217), F235 (= F230), T236 (= T231), G237 (= G232), S238 (= S233), V241 (= V236), I245 (≠ L241), E260 (= E254), L261 (= L255), G262 (= G256), C294 (= C288), E391 (= E385), F393 (= F387), F457 (≠ W451)
6aljA Aldh1a2 liganded with NAD and compound win18,446 (see paper)
48% identity, 94% coverage: 31:483/483 of query aligns to 33:489/492 of 6aljA
- active site: N161 (= N156), E260 (= E254), C294 (= C288), E468 (= E462)
- binding N,N'-(octane-1,8-diyl)bis(2,2-dichloroacetamide): G116 (≠ A111), T120 (= T115), N161 (= N156), F162 (= F157), L165 (≠ M160), M166 (≠ I161), W169 (= W164), E260 (= E254), C293 (≠ V287), C294 (= C288), T295 (≠ S289), L451 (≠ T445), N452 (≠ D446), A453 (≠ V447), M469 (≠ H463)
- binding nicotinamide-adenine-dinucleotide: I157 (= I152), I158 (≠ V153), P159 (= P154), W160 (= W155), N161 (= N156), K184 (= K179), A186 (= A181), E187 (= E182), G217 (= G212), G221 (= G216), A222 (≠ D217), F235 (= F230), T236 (= T231), G237 (= G232), S238 (= S233), V241 (= V236), E260 (= E254), L261 (= L255), C294 (= C288), K340 (≠ A334), Q341 (= Q335), K344 (≠ T338), E391 (= E385), F393 (= F387)
O94788 Retinal dehydrogenase 2; RALDH 2; RalDH2; Aldehyde dehydrogenase family 1 member A2; Retinaldehyde-specific dehydrogenase type 2; RALDH(II); EC 1.2.1.36 from Homo sapiens (Human) (see 6 papers)
48% identity, 94% coverage: 31:483/483 of query aligns to 59:515/518 of O94788
- A110 (= A79) to V: in dbSNP:rs35365164
- Q182 (≠ A151) to K: in DIH4; decreased retinoic acid biosynthetic process
- IPW 184:186 (≠ VPW 153:155) binding
- KPAE 210:213 (= KPAE 179:182) binding
- STE 264:266 (≠ SPS 233:235) binding
- C320 (= C288) active site, Nucleophile
- R347 (≠ I315) to H: in DIH4; decreased expression
- V348 (≠ K316) to I: in dbSNP:rs4646626
- KQYNK 366:370 (≠ AQMKT 334:338) binding
- A383 (= A351) to T: in DIH4; unknown pathological significance
- E417 (= E385) binding
- E436 (≠ R404) to K: in dbSNP:rs34744827
- S461 (≠ A429) to Y: in DIH4; decreased retinoic acid biosynthetic process
Sites not aligning to the query:
- 50 E → G: in dbSNP:rs34266719
7jwwA Crystal structure of human aldh1a1 bound to compound (r)-28 (see paper)
46% identity, 98% coverage: 10:483/483 of query aligns to 23:491/494 of 7jwwA
- active site: N163 (= N156), K186 (= K179), E262 (= E254), C296 (= C288), E393 (= E385), E470 (= E462)
- binding 5-{4-[(Z)-2-hydroxyethenyl]phenyl}-1-methyl-6-{[(1R)-1-phenylethyl]sulfanyl}-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one: G118 (≠ A111), T122 (= T115), F164 (= F157), V167 (≠ M160), M168 (≠ I161), W171 (= W164), Y290 (≠ F282), C295 (≠ V287), C296 (= C288), I297 (≠ S289), G451 (= G443), V453 (≠ T445), F459 (≠ W451)
7jwvA Crystal structure of human aldh1a1 bound to compound (r)-28 (see paper)
46% identity, 98% coverage: 10:483/483 of query aligns to 23:491/494 of 7jwvA