Comparing BPHYT_RS30780 FitnessBrowser__BFirm:BPHYT_RS30780 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 6 hits to proteins with known functional sites (download)
8jejA Cryo-em structure of na-dithionite reduced membrane-bound fructose dehydrogenase from gluconobacter japonicus
24% identity, 96% coverage: 10:580/594 of query aligns to 7:535/540 of 8jejA
7w2jD Cryo-em structure of membrane-bound fructose dehydrogenase from gluconobacter japonicus
24% identity, 96% coverage: 10:580/594 of query aligns to 4:532/537 of 7w2jD
8grjB Crystal structure of gamma-alpha subunit complex from burkholderia cepacia fad glucose dehydrogenase in complex with gluconolactone
21% identity, 81% coverage: 99:582/594 of query aligns to 90:529/531 of 8grjB
Sites not aligning to the query:
7qfdA Crystal structure of a bacterial pyranose 2-oxidase complex with d- glucose (see paper)
30% identity, 23% coverage: 447:582/594 of query aligns to 324:451/458 of 7qfdA
Sites not aligning to the query:
7qvaA Crystal structure of a bacterial pyranose 2-oxidase in complex with mangiferin (see paper)
30% identity, 23% coverage: 447:582/594 of query aligns to 323:450/457 of 7qvaA
Sites not aligning to the query:
7qf8A Crystal structure of a bacterial pyranose 2-oxidase from pseudoarthrobacter siccitolerans (see paper)
30% identity, 23% coverage: 447:582/594 of query aligns to 358:485/494 of 7qf8A
Sites not aligning to the query:
>BPHYT_RS30780 FitnessBrowser__BFirm:BPHYT_RS30780
MANISKPKVDAVVVGMGWSGSIMAIELADAGLTVVGLERGENRDTYPDFAYPKVADELTH
VQRFKLMQSLAHETVTIRRQAQEVALPLRQYGAFLFGDGVGGSGVHWNGFTYRATEAELK
LRSHYEQRYGKGFIPDDMTIQDWPVSAAELEPFYDRFEYVAGTSGKAGNLNGQSVGGGNP
FEAPRSRDYALPPLPTAYPSMLFDQAAREVGYHPYPTPASIASKAYTNPYGMQLGPCNFC
GYCELFGCYMFSKASPQSCILPALARKPNFELRDRSAVVKVNLDSTGKRATGVTYIDAQG
HTVEQPADIVALCAYQMHNVRLLLLSGIGKPYDPATGEGTVGKNYAYQKNSKIQVFFDKD
VAINPFIGSGAGGVVYDDFNADNFDHGPLNFIGGAITFATVTGGRPIAQALVPPGTPKWG
SGWKKAVKDHYLHSFAISTQGSVMSYRDNYLDLDPTYKDAYGLPLLRMTFDWKDNEGRMT
QFVSHKAADVARAMNPKPQSVAINAGKPGDHFDVGPYQSTHTTGGAIAGDRPDNSVVNKY
LQSWDVPNVFVTGACSFPQNLGINPTGTIGAMTYYAAKTIRETYLKNPGPLVQA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory