Comparing BPHYT_RS34090 FitnessBrowser__BFirm:BPHYT_RS34090 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
4ki0F Crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to maltohexaose (see paper)
23% identity, 57% coverage: 160:401/425 of query aligns to 221:463/490 of 4ki0F
P02916 Maltose/maltodextrin transport system permease protein MalF from Escherichia coli (strain K12) (see 4 papers)
23% identity, 57% coverage: 160:401/425 of query aligns to 232:478/514 of P02916
>BPHYT_RS34090 FitnessBrowser__BFirm:BPHYT_RS34090
MTTITIAADSTPESSGRLKRELKAAEARKRAMALLLIAPLAIFLLLIFVVPIGALLTRAA
QNPEVVNALPHTVASLSAWDRKTPPPDTAYTALAVDLAAIADSDGMGALARRLNVEIPGY
RSLVAKSARAMPFVDDNSKPLQLTPAQMHAKFAELDERWNDIAYWQAIAKNAGAYSPFYL
LASLDHKQDAFGHIIPTDPDQQIYLAVFSRTFVIGAAVTFFALLLGYPLAYWISTLSERR
ANLVMILVLIPFWTSILVRVAAWIVILQSEGLVNKALIGSGLLHDPLALLFNRTGVYISM
THILLPFMILPLYSVMKSIPPTYQRAAISLGSHPFAAFWRVYVPQTYPGIGAGALLVFIL
AIGYYITPALLGGPNDQMVSYYVAYFTNVTINWGMACALGGLLLAATLVLYVIYGRFTRS
SLSLG
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory