SitesBLAST – Find functional sites

 

SitesBLAST

Comparing BWI76_RS01735 FitnessBrowser__Koxy:BWI76_RS01735 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 2 hits to proteins with known functional sites (download)

P69797 PTS system mannose-specific EIIAB component; EIIAB-Man; EIII-Man; EC 2.7.1.191 from Escherichia coli (strain K12) (see 4 papers)
52% identity, 97% coverage: 1:159/164 of query aligns to 162:320/323 of P69797

query
sites
P69797
M
 
M
N
 
V
I
 
I
T
 
G
L
 
L
A
 
A
R
 
R
I
 
I
D
 
D
D
 
D
R
 
R
L
 
L
I
 
I
H
|
H
G
 
G
Q
 
Q
V
 
V
T
 
A
T
 
T
V
 
R
W
 
W
S
 
T
K
 
K
V
 
E
A
 
T
N
 
N
A
 
V
Q
 
S
R
 
R
I
 
I
I
 
I
I
 
V
C
 
V
N
 
S
D
 
D
D
 
E
V
 
V
Y
 
A
N
 
A
D
 
D
D
 
T
V
 
V
R
 
R
R
 
K
T
 
T
L
 
L
L
 
L
R
 
T
Q
 
Q
A
 
V
A
 
A
P
 
P
P
 
P
G
 
G
M
 
V
K
 
T
V
 
A
N
x
H
V
 
V
V
 
V
N
 
D
L
 
V
E
 
A
K
 
K
A
 
M
V
 
I
A
 
R
V
 
V
Y
 
Y
H
 
N
N
 
N
P
 
P
Q
x
K
Y
 
Y
Q
 
A
D
 
G
E
 
E
T
 
R
V
 
V
F
 
M
Y
 
L
L
 
L
F
 
F
T
 
T
N
 
N
P
 
P
Q
 
T
D
 
D
V
 
V
L
 
E
T
 
R
M
 
L
V
 
V
Q
 
E
Q
 
G
G
 
G
V
 
V
N
 
K
I
 
I
A
 
T
T
 
S
L
 
V
N
 
N
I
 
V
G
 
G
G
 
G
M
 
M
A
 
A
W
 
F
R
 
R
P
 
Q
G
 
G
K
 
K
K
 
T
Q
 
Q
L
 
V
T
 
N
K
 
N
A
 
A
V
 
V
S
 
S
L
 
V
D
 
D
E
 
E
A
 
K
D
 
D
I
 
I
N
 
E
A
 
A
F
 
F
Q
 
K
Q
 
K
L
 
L
D
 
N
K
 
A
L
 
R
G
 
G
V
 
I
N
 
E
L
 
L
D
 
E
L
 
V
R
 
R
V
 
K
V
 
V
A
 
S
S
 
T
D
 
D
P
 
P
S
 
K
V
 
L
N
 
K
I
 
M
L
 
M
D
 
D
K
 
L
I
 
I
A
 
S
E
 
K

Sites not aligning to the query:

P26380 PTS system fructose-specific EIIB component; EIIB-Fru; Fructose-specific phosphotransferase enzyme IIB component; lev-PTS; p18; EC 2.7.1.202 from Bacillus subtilis (strain 168) (see paper)
46% identity, 91% coverage: 1:150/164 of query aligns to 2:151/163 of P26380

query
sites
P26380
M
 
M
N
 
N
I
 
I
T
 
V
L
 
L
A
 
A
R
 
R
I
 
I
D
 
D
D
 
D
R
 
R
L
 
F
I
 
I
H
|
H
G
 
G
Q
 
Q
V
 
I
T
 
L
T
 
T
V
 
R
W
 
W
S
 
I
K
 
K
V
 
V
A
 
H
N
 
A
A
 
A
Q
 
D
R
 
R
I
 
I
I
 
I
I
 
V
C
 
V
N
 
S
D
 
D
D
 
D
V
 
I
Y
 
A
N
 
Q
D
 
D
D
 
E
V
 
M
R
 
R
R
 
K
T
 
T
L
 
L
L
 
I
R
 
L
Q
 
S
A
 
V
A
 
A
P
 
P
P
 
S
G
 
N
M
 
V
K
 
K
V
 
A
N
 
S
V
 
A
V
 
V
N
 
S
L
 
V
E
 
S
K
 
K
A
 
M
V
 
A
A
 
K
V
 
A
Y
 
F
H
 
H
N
 
S
P
 
P
Q
 
R
Y
 
Y
Q
 
E
D
 
G
E
 
V
T
 
T
V
 
A
F
 
M
Y
 
L
L
 
L
F
 
F
T
 
E
N
 
N
P
 
P
Q
 
S
D
 
D
V
 
I
L
 
V
T
 
S
M
 
L
V
 
I
Q
 
E
Q
 
A
G
 
G
V
 
V
N
 
P
I
 
I
A
 
K
T
 
T
L
 
V
N
 
N
I
 
V
G
 
G
G
 
G
M
 
M
A
 
R
W
 
F
R
 
E
P
 
N
G
 
H
K
 
R
K
 
R
Q
 
Q
L
 
I
T
 
T
K
 
K
A
 
S
V
 
V
S
 
S
L
 
V
D
 
T
E
 
E
A
 
Q
D
 
D
I
 
I
N
 
K
A
 
A
F
 
F
Q
 
E
Q
 
T
L
 
L
D
 
S
K
 
D
L
 
K
G
 
G
V
 
V
N
 
K
L
 
L
D
 
E
L
 
L
R
 
R
V
 
Q
V
 
L
A
 
P
S
 
S
D
 
D
P
 
A
S
 
S

Query Sequence

>BWI76_RS01735 FitnessBrowser__Koxy:BWI76_RS01735
MNITLARIDDRLIHGQVTTVWSKVANAQRIIICNDDVYNDDVRRTLLRQAAPPGMKVNVV
NLEKAVAVYHNPQYQDETVFYLFTNPQDVLTMVQQGVNIATLNIGGMAWRPGKKQLTKAV
SLDEADINAFQQLDKLGVNLDLRVVASDPSVNILDKIAEQSVTE

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory