Comparing BWI76_RS03530 FitnessBrowser__Koxy:BWI76_RS03530 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 1 hits to proteins with known functional sites (download)
Q02DS7 Tryptophan-specific transport protein; Tryptophan permease from Pseudomonas aeruginosa (strain UCBPP-PA14) (see paper)
62% identity, 99% coverage: 5:418/418 of query aligns to 3:417/417 of Q02DS7
>BWI76_RS03530 FitnessBrowser__Koxy:BWI76_RS03530
MATLSVSKAVSTNTPSLIGGAMIIGGTIIGAGMFSLPVVMSGAWFFWSLLALIFTWFCML
HSGLMILEANLNYHIGASFDTITKDLLGNGWNIINGLTVAFVLYILTYAYISASGSVIQH
TFAQMDLAVPARLGGLAFALVVAFIVWLSTKAVSRMTTIVLGAKILTFFMTFGGLMWHVE
PAILFNRAEGNASYLPYVLMTLPFCLASFGYHGNVPSLMKYYGKDPLTIRRCLLLGTLMA
LVLYIIWLVGTMGNIPRPAFIAIAEKGGNIDVLVQTLSGLLNSSTLDLLLTVFSNFAVAS
SFLGVTLGLFDYLADLFKFDDSRLGRFKTALVTFLPPIAGGLLWPNGFIYAIGFAGLAAT
VWAAIVPALLARASRRRFGSPNYRVWGGNAMIILILCFGGANAIIHILSSFNLLPVYR
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory