SitesBLAST – Find functional sites

 

SitesBLAST

Comparing BWI76_RS04440 FitnessBrowser__Koxy:BWI76_RS04440 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

P02903 Citrate lyase acyl carrier protein; Citrate lyase gamma chain from Klebsiella pneumoniae (see paper)
93% identity, 100% coverage: 1:97/97 of query aligns to 1:97/97 of P02903

query
sites
P02903
M
 
M
E
 
E
M
 
M
M
 
K
I
 
I
D
 
D
A
 
A
L
 
L
A
 
A
G
 
G
T
 
T
L
 
L
E
 
E
S
|
S
S
 
S
D
 
D
V
 
V
M
 
M
V
 
V
R
 
R
I
 
I
G
 
G
P
 
P
A
 
A
N
 
A
E
 
Q
P
 
P
G
 
G
I
 
I
Q
 
Q
L
 
L
E
 
E
I
 
I
D
 
D
S
 
S
I
 
I
V
 
V
K
 
K
Q
 
Q
Q
 
Q
F
 
F
G
 
G
A
 
A
A
 
A
I
 
I
E
 
E
Q
 
Q
V
 
V
V
 
V
R
 
R
E
 
E
T
 
T
L
 
L
A
 
A
Q
 
Q
L
 
L
G
 
G
V
 
V
T
 
K
R
 
Q
A
 
A
N
 
N
V
 
V
V
 
V
V
 
V
D
 
D
D
 
D
K
 
K
G
 
G
A
 
A
L
 
L
E
 
E
C
 
C
V
 
V
L
 
L
K
 
R
A
 
A
R
 
R
V
 
V
Q
 
Q
A
 
A
A
 
A
A
 
A
L
 
L
R
 
R
A
 
A
A
 
A
Q
 
Q
Q
 
Q
S
 
T
Q
 
Q
L
 
L
Q
 
Q
W
 
W
S
 
S
Q
 
Q
L
 
L

Query Sequence

>BWI76_RS04440 FitnessBrowser__Koxy:BWI76_RS04440
MEMMIDALAGTLESSDVMVRIGPANEPGIQLEIDSIVKQQFGAAIEQVVRETLAQLGVTR
ANVVVDDKGALECVLKARVQAAALRAAQQSQLQWSQL

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory