Comparing BWI76_RS04555 FitnessBrowser__Koxy:BWI76_RS04555 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 4 hits to proteins with known functional sites (download)
5x9rA Structural insights into the elevator-like mechanism of the sodium/citrate symporter cits (see paper)
30% identity, 90% coverage: 33:437/451 of query aligns to 1:404/416 of 5x9rA
5a1sD Crystal structure of the sodium-dependent citrate symporter secits form salmonella enterica. (see paper)
29% identity, 90% coverage: 32:437/451 of query aligns to 6:419/434 of 5a1sD
5xarD Structural insights into the elevator-like mechanism of the sodium/citrate symporter cits (see paper)
29% identity, 90% coverage: 33:437/451 of query aligns to 9:398/411 of 5xarD
5xasB Structural insights into the elevator-like mechanism of the sodium/citrate symporter cits (see paper)
29% identity, 90% coverage: 33:437/451 of query aligns to 6:394/407 of 5xasB
>BWI76_RS04555 FitnessBrowser__Koxy:BWI76_RS04555
MSTTDNAFPATIDPINTPKAPLKQRWWHILDNWKVGIIPLPLFLLAGGLIALDCLGGKLP
SDIVVMVATLAFFGFACGEFGKRLPILGKLGAAAICATFIPSALVHYGLLPDVVVESTTK
FYKSTNILYLYICCIIVGSIMSMNRTTLIQGFMRIFFPMLCGEIVGMVVGVGVGTALGLE
PFQVFFFIVLPIMAGGVGEGAIPLSIGYAALMHMDQGVALGRVLPMVMLGSLTAIVIAGG
LNQLGKRFPHLTGEGQLMPNRRNETHRETPAEGKMDVTTLASGALLAVLLYMLGMLGQKT
IGLPAPVGMLFLAVLLKLVNGVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELV
NAFTLTNLLVIISTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTSGNR
MNLMPFAQIATRIGGAINVSLGLLFLSHFLA
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory