SitesBLAST – Find functional sites

 

SitesBLAST

Comparing BWI76_RS06075 FitnessBrowser__Koxy:BWI76_RS06075 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

B5Z7I3 Ergothioneine transport permease/ergothioneine binding protein EgtU from Helicobacter pylori (strain G27) (see paper)
28% identity, 50% coverage: 71:207/275 of query aligns to 53:184/553 of B5Z7I3

query
sites
B5Z7I3
F
 
F
M
 
I
D
 
D
A
 
-
T
 
L
L
 
L
W
 
A
Q
 
Q
H
 
H
L
 
F
A
 
-
A
 
-
S
 
-
L
 
-
T
 
-
R
 
-
I
 
I
V
 
I
I
 
V
A
 
A
L
 
L
-
 
S
-
 
G
L
 
F
A
 
L
A
 
V
V
 
L
L
 
V
L
 
F
G
 
G
V
 
V
P
 
L
V
 
I
G
 
G
I
 
V
A
 
F
M
 
A
G
 
F
L
 
Y
S
 
N
P
 
S
T
 
K
V
 
A
R
 
R
G
 
A
I
 
F
L
 
L
D
 
L
P
 
P
L
 
V
I
 
V
E
 
N
L
 
F
Y
 
L
R
 
Y
P
 
T
V
 
I
P
 
P
P
 
S
L
 
L
A
 
A
Y
 
L
L
 
F
P
 
A
L
 
L
M
 
F
V
 
I
I
 
P
W
 
V
F
 
I
G
 
G
I
 
V
G
 
G
E
 
L
T
 
K
S
 
N
K
 
A
I
 
L
L
 
L
L
 
V
I
 
L
Y
 
V
L
 
L
A
 
Y
I
 
G
F
 
L
A
 
L
P
 
P
V
 
I
A
 
V
M
 
Y
S
 
S
A
 
T
L
 
Y
A
 
N
G
 
A
V
 
L
K
 
K
S
 
E
A
 
V
Q
 
R
Q
 
E
V
 
E
R
 
V
I
 
I
R
 
K
A
 
A
A
 
A
Q
 
I
A
 
G
L
 
L
G
 
G
A
 
C
S
 
N
R
 
P
A
 
K
Q
 
E
V
 
L
L
 
F
W
 
F
L
 
R
V
 
V
I
 
H
L
 
F
P
 
L
G
 
L
A
 
A
L
 
I
P
 
P
E
 
Q
I
 
I
L
 
L
T
 
A
G
 
G
L
 
L
R
 
R
I
 
I
G
 
A
L
 
V

Sites not aligning to the query:

Query Sequence

>BWI76_RS06075 FitnessBrowser__Koxy:BWI76_RS06075
MSVVINDKPRQRGLKWRWPLSRQLSLSLATLAVLLAIWWAVAALQLISPLFLPPPGQVWQ
KLIAIAGPQGFMDATLWQHLAASLTRIVIALLAAVLLGVPVGIAMGLSPTVRGILDPLIE
LYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMSALAGVKSAQQVRIRAAQALG
ASRAQVLWLVILPGALPEILTGLRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATD
VVLAGIAVIAIIAFLLELGLRALQRRLTPWHGEVQ

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory