Comparing BWI76_RS10670 FitnessBrowser__Koxy:BWI76_RS10670 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
O31645 PTS system mannose-specific EIIBCA component; EIIBCA-Man; EII-Man; EC 2.7.1.191 from Bacillus subtilis (strain 168) (see 2 papers)
42% identity, 90% coverage: 13:335/358 of query aligns to 125:458/650 of O31645
Sites not aligning to the query:
P20966 PTS system fructose-specific EIIB'BC component; EIIB'BC-Fru; EC 2.7.1.202 from Escherichia coli (strain K12) (see paper)
42% identity, 82% coverage: 13:307/358 of query aligns to 228:521/563 of P20966
Sites not aligning to the query:
>BWI76_RS10670 FitnessBrowser__Koxy:BWI76_RS10670
MNELVQILKNTRQHLMTGVSHMIPFVVSGGILLAVSVMLYGKGAVPDAATDPNLKKLFDI
GVAGLTLMVPFLAAYIGYSISDRAALAPCAIGAWVGNSFGAGFFGALIAGIIGGLVVYYL
KKIPVHKVLRSVMPIFVIPIIGTFITAGIMMWGLGEPIGALTASLTGWLQGMREGSIVIL
AIIMGLMLAFDMGGPVNKVAYAFMLICVSQGVYSVVAIAAVGIAVPPLGMGLATLIGRKY
FSAEERETGKAALVMGCVGVTEGAIPFAAADPLRVIPANMIGAAAGCVTAALLGAQCYAG
WGGLIVLPVVEGKGGFIAGLAVGAIVSAACVILLKALAKKKTSDAKADDEMDLDFEIN
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory