Comparing BWI76_RS14905 FitnessBrowser__Koxy:BWI76_RS14905 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 1 hits to proteins with known functional sites (download)
P69831 PTS system galactitol-specific EIIC component; EIIC-Gat; Galactitol permease IIC component from Escherichia coli (strain K12) (see paper)
39% identity, 98% coverage: 2:411/420 of query aligns to 4:410/451 of P69831
Sites not aligning to the query:
>BWI76_RS14905 FitnessBrowser__Koxy:BWI76_RS14905
MDIINSIISLGASVMMPVIFFIIALCFGVKVGTAFKAGMLVGIGFEGVGLVIGLLLTNLG
PASQAMVERIGLHLTVVDTGWPTASTIGWGSPLMLPVVVGFIVINIAMLLLKLTKTVNID
IFNYWIFLIMGSVVYAGTGNYWLSVGITFGIFILTLLAADLTAPYLQKNYNLQGISFPHL
TCITYVPFGIACNYIIDKIPLINKINFDPESINKKFGVFGEPLTLGFVLGLLLAFLAGYD
VSAAVSLAIKVSAAMLLLPKMIEILVQGLLIVRDAAEAKLKAKFPDRDFYIGMDTALLIG
EPSVLATGLLLIPMAVVLAIILPGNRVLPFVDLASLMFLLAMVTPFCKRNMFRMFITGTL
VVSCILYVGTDISHEYTQAAVNSHIPVPEGMSEITNIVGGATTPVGWLALKFGEFFSTAP
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory