Comparing BWI76_RS16670 FitnessBrowser__Koxy:BWI76_RS16670 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 13 hits to proteins with known functional sites (download)
4ib2A Crystal structure of a putative lipoprotein (rumgna_00858) from ruminococcus gnavus atcc 29149 at 1.76 a resolution
38% identity, 93% coverage: 17:256/258 of query aligns to 1:245/247 of 4ib2A
4qhqA The structure of a nutrient binding protein from burkholderia cenocepacia bound to methionine
36% identity, 91% coverage: 23:258/258 of query aligns to 1:241/241 of 4qhqA
1xs5A The crystal structure of lipoprotein tp32 from treponema pallidum (see paper)
35% identity, 90% coverage: 21:252/258 of query aligns to 2:234/240 of 1xs5A
3gxaC Crystal structure of gna1946 (see paper)
37% identity, 86% coverage: 36:257/258 of query aligns to 16:237/244 of 3gxaC
6dzxA Crystal structure of the n. Meningitides methionine-binding protein in its d-methionine bound conformation. (see paper)
36% identity, 86% coverage: 36:257/258 of query aligns to 15:236/240 of 6dzxA
P04846 Lipoprotein 28 from Escherichia coli (strain K12) (see paper)
36% identity, 94% coverage: 17:258/258 of query aligns to 27:272/272 of P04846
Sites not aligning to the query:
4yahX Crystal structure of the methionine binding protein, metq (see paper)
35% identity, 83% coverage: 46:258/258 of query aligns to 28:243/245 of 4yahX
3tqwA Structure of a abc transporter, periplasmic substrate-binding protein from coxiella burnetii (see paper)
36% identity, 85% coverage: 26:244/258 of query aligns to 4:222/235 of 3tqwA
4oteB Crystal structure of a putative lipoprotein (cd630_1653) from clostridium difficile 630 at 2.20 a resolution
34% identity, 92% coverage: 21:258/258 of query aligns to 3:240/240 of 4oteB
3k2dA Crystal structure of immunogenic lipoprotein a from vibrio vulnificus (see paper)
33% identity, 76% coverage: 46:242/258 of query aligns to 31:228/237 of 3k2dA
4ntlA Crystal structure of a lipoprotein, yaec family (ef3198) from enterococcus faecalis v583 at 1.80 a resolution
30% identity, 92% coverage: 21:258/258 of query aligns to 1:242/242 of 4ntlA
6jf1A Crystal structure of the substrate binding protein of a methionine transporter from streptococcus pneumoniae (see paper)
31% identity, 88% coverage: 27:252/258 of query aligns to 22:254/260 of 6jf1A
Sites not aligning to the query:
1p99A 1.7a crystal structure of protein pg110 from staphylococcus aureus (see paper)
38% identity, 71% coverage: 37:218/258 of query aligns to 14:198/255 of 1p99A
Sites not aligning to the query:
>BWI76_RS16670 FitnessBrowser__Koxy:BWI76_RS16670
MKKTTLAAGLLALFALSASANETLTVGATPVPHAEILEFVKPELAKQGVDLKIKVFNDFI
QPNQQLAEKNLDANYYQYRPFLDNYNQTRHTHLLPVVGVHIEPFGAYSSKYKTIKEVPDG
ATVAIPNDPVNTGRALVMLSNAGLITLKNPRDPQSATKDITANPHRFKIRELEGAMLARA
VNQVDLAFIFANYALEAGIDTDKALLVEKGSDLYVEYLVARPDNINDPGIQKLAKALNSD
RVRSFILTRYKGKILPGF
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory