Comparing BWI76_RS17875 FitnessBrowser__Koxy:BWI76_RS17875 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
4rqoB Crystal structure of l-serine dehydratase from legionella pneumophila (see paper)
48% identity, 99% coverage: 2:451/454 of query aligns to 3:445/448 of 4rqoB
Sites not aligning to the query:
2iafA Crystal structure of a fragment (residues 11 to 161) of l-serine dehydratase from legionella pneumophila
42% identity, 32% coverage: 16:159/454 of query aligns to 1:140/140 of 2iafA
>BWI76_RS17875 FitnessBrowser__Koxy:BWI76_RS17875
MISIFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLNEVTRLAVDVYGSLSLTGKGH
HTDIAIIMGLAGNQPDTVDIDAIPAFIRDVEERGRLLLAQGQHEVDFPKNDGMRFRSDNL
PLHENGMTIHAWSGEKEIYSKTYYSIGGGFIVDEEHFGKESASELAVPYPFKSAQEMLGY
CKQTGMSLSGMVMQNELALHSKKEIEDYFANIWQTMRACIDRGMNTEGVLPGPLRVPRRA
SALRRMLVASDKLSNDPMNVVDWVNMFALAVNEENAAGGRVVTAPTNGACGIVPAVLAYY
DHFIEPVSPDIYIRYFLASGAIGTLYKMNASISGAEVGCQGEVGVACSMAAAGLAEILGA
SPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPCIERNAIASVKAINASRMAMRRTSEPRVS
LDKVIETMYETGKDMNAKYRETSRGGLAIKVQCD
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory