SitesBLAST – Find functional sites

 

SitesBLAST

Comparing BWI76_RS17950 to proteins with known functional sites using BLASTp with E ≤ 0.001.

Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures

Found 1 hits to proteins with known functional sites (download)

P64512 PhoP/PhoQ regulator MgrB from Escherichia coli (strain K12) (see paper)
72% identity, 100% coverage: 1:47/47 of query aligns to 1:47/47 of P64512

query
sites
P64512
M
 
M
K
 
K
K
 
K
L
 
F
R
 
R
W
 
W
V
 
V
L
 
V
L
 
L
T
 
V
V
 
V
I
 
V
I
 
V
A
 
L
G
 
A
C
|
C
L
 
L
L
 
L
L
 
L
W
 
W
T
 
A
Q
 
Q
M
 
V
L
 
F
N
 
N
V
 
M
M
 
M
C
|
C
D
 
D
Q
 
Q
D
 
D
V
 
V
Q
 
Q
F
 
F
F
 
F
S
 
S
G
 
G
I
 
I
C
|
C
T
 
A
I
 
I
N
 
N
K
 
Q
F
 
F
I
 
I
P
 
P
W
 
W

Query Sequence

>BWI76_RS17950
MKKLRWVLLTVIIAGCLLLWTQMLNVMCDQDVQFFSGICTINKFIPW

Or try a new SitesBLAST search

SitesBLAST's Database

SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory