Comparing BWI76_RS21415 FitnessBrowser__Koxy:BWI76_RS21415 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
A0A0H2VG78 Glucose transporter GlcP; Glucose/H(+) symporter from Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) (see paper)
23% identity, 78% coverage: 45:382/432 of query aligns to 29:381/446 of A0A0H2VG78
Sites not aligning to the query:
Q9Y7Q9 Probable metabolite transporter C2H8.02 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
23% identity, 50% coverage: 17:234/432 of query aligns to 35:262/583 of Q9Y7Q9
Sites not aligning to the query:
Q8NLB7 Gentisate transporter from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) (see paper)
25% identity, 66% coverage: 1:283/432 of query aligns to 12:291/444 of Q8NLB7
Sites not aligning to the query:
>BWI76_RS21415 FitnessBrowser__Koxy:BWI76_RS21415
MTESSISERESQDHGDTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTT
QLLQTAGVFAAGFLMRPIGGWIFGRIADRRGRKTSMLISVCMMCFGSLVIACLPGYATIG
TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGKKGFYASFQYVTLIGGQLLAVLVV
VALQQILSDEALHAWGWRIPFALGAVLAIVALWLRRQLDETSKQETRALKEAGSFKGLWR
NRKAFIMVLGFTAAGSLSFYTFTTYMQKYLVNTAGMTAGTASMIMTAALFVYMLVQPLFG
ALSDKIGRRTSMLCFGVLVTVFTVPILNALQNVSSPYAAFALVICALLIVSFYTSISGIL
KAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSAGIEHAFYWYVTVMGAIAFLVS
LTLHRKGKGLRL
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory