Comparing BWI76_RS23725 FitnessBrowser__Koxy:BWI76_RS23725 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 6 hits to proteins with known functional sites (download)
6e9nA E. Coli d-galactonate:proton symporter in the inward open form (see paper)
22% identity, 95% coverage: 21:442/445 of query aligns to 1:409/409 of 6e9nA
P0AA76 D-galactonate transporter; D-galactonate/H(+) symporter from Escherichia coli (strain K12) (see paper)
21% identity, 98% coverage: 9:442/445 of query aligns to 7:428/430 of P0AA76
6e9oA E. Coli d-galactonate:proton symporter mutant e133q in the outward substrate-bound form (see paper)
22% identity, 97% coverage: 11:442/445 of query aligns to 1:393/393 of 6e9oA
Q8NLB7 Gentisate transporter from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) (see paper)
25% identity, 67% coverage: 26:322/445 of query aligns to 43:319/444 of Q8NLB7
Sites not aligning to the query:
Q5EXK5 3-hydroxybenzoate transporter MhbT from Klebsiella oxytoca (see paper)
21% identity, 78% coverage: 4:352/445 of query aligns to 11:351/452 of Q5EXK5
Q51955 4-hydroxybenzoate transporter PcaK from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 2 papers)
23% identity, 41% coverage: 4:184/445 of query aligns to 18:181/448 of Q51955
Sites not aligning to the query:
>BWI76_RS23725 FitnessBrowser__Koxy:BWI76_RS23725
MTTINQTPAGEQGAKKRLIHRFSWVSLLVCWLIWVLNAYDREMILRLGPVISKEFSLSPE
QWGNVVALIMVALAVLDIPGSIWSDRYGSGWKRARFQVPLVLGYTALSFISGIKAISHGL
TAFVLLRVGVNLGAGWGEPVGVSNTAEWWPKEKRGFALGVHHTGYPIGALLSGVVASLVL
SAFGEGSWRYCFLLALIVAIPLMIFWAKYSTADRINTLYQHIDSQGMTRPATQESSHVAK
GEGMKTFLRTLRNRNISLTAGNTLLTQIVYMGINVVLPPYLYHVSGLSLAASAGLSIIFT
LTGTLGQIIWPWLSDSFGRKRTLIVCGLWMSIGIALFYFATNMPRLIAIQLFFGLVANAV
WPIYYAMASDSAEERATSTANGIITTAMFIGGGLSPLLMGWLIQFGGGWENPAGYIYAFF
TMAGCALLGMLLQLMTTDKTPRKAH
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory