Comparing BWI76_RS23870 FitnessBrowser__Koxy:BWI76_RS23870 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 10 hits to proteins with known functional sites (download)
4lhdA Crystal structure of synechocystis sp. Pcc 6803 glycine decarboxylase (p-protein), holo form with pyridoxal-5'-phosphate and glycine, closed flexible loop (see paper)
58% identity, 100% coverage: 1:953/957 of query aligns to 6:952/952 of 4lhdA
Q94B78 Glycine dehydrogenase (decarboxylating) 1, mitochondrial; Glycine cleavage system P protein 1; Glycine decarboxylase 1; Glycine decarboxylase P-protein 1; AtGLDP1; Glycine dehydrogenase (aminomethyl-transferring) 1; EC 1.4.4.2 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
54% identity, 99% coverage: 12:955/957 of query aligns to 77:1029/1037 of Q94B78
6i34B Crystal structure of neanderthal glycine decarboxylase (p-protein)
54% identity, 99% coverage: 8:952/957 of query aligns to 7:954/954 of 6i34B
6i35A Crystal structure of human glycine decarboxylase (p-protein) bound with pyridoxyl-glycine-5'-monophosphate
54% identity, 99% coverage: 8:953/957 of query aligns to 9:953/953 of 6i35A
6i33A Crystal structure of human glycine decarboxylase (p-protein)
54% identity, 99% coverage: 8:953/957 of query aligns to 9:950/950 of 6i33A
P15505 Glycine dehydrogenase (decarboxylating), mitochondrial; Glycine cleavage system P protein; Glycine decarboxylase; Glycine dehydrogenase (aminomethyl-transferring); EC 1.4.4.2 from Gallus gallus (Chicken) (see paper)
52% identity, 99% coverage: 8:957/957 of query aligns to 47:993/1004 of P15505
6i33B Crystal structure of human glycine decarboxylase (p-protein)
53% identity, 99% coverage: 8:952/957 of query aligns to 7:925/925 of 6i33B
1wyuB Crystal structure of glycine decarboxylase (p-protein) of the glycine cleavage system, in holo form (see paper)
40% identity, 45% coverage: 485:914/957 of query aligns to 46:465/473 of 1wyuB
1wyvA Crystal structure of glycine decarboxylase (p-protein) of the glycine cleavage system, in inhibitor-bound form (see paper)
34% identity, 40% coverage: 27:409/957 of query aligns to 12:396/437 of 1wyvA
1wyuA Crystal structure of glycine decarboxylase (p-protein) of the glycine cleavage system, in holo form (see paper)
34% identity, 40% coverage: 27:409/957 of query aligns to 12:396/437 of 1wyuA
>BWI76_RS23870 FitnessBrowser__Koxy:BWI76_RS23870
MTQTLGQLENRDAFIERHIGPDALQQQEMLKTVGADSLNALIGQIVPQDIQLATPPQVGE
ATTEFAALAELKAIAGRNKRFKSYIGMGYTAVQLPPVIQRNMLENPGWYTAYTPYQPEVS
QGRLESLLNFQQVTLDLTGLDIASASLLDEATAAAEAMAMAKRVSKLKNANRFFVAADVH
PQTLDVVRTRAETFGFDVIVDDAEKALDHQDVFGVLLQQVGTTGEVHDYSKLIADLKARK
VIVSVAADFMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKDEFKRSMPGR
IIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVFHGPAGLKRI
ASRIHRLTDILADGLQKKGLKLRHAHYFDTLCVEVADKAAVLARAEALRINLRSDIHHAV
GITLDEATTREDVLNLFRAILGDDHGLDIDTLDKDVALDSRSIPASMLRDDAILTHPVFN
RYHSETEMMRYMHALERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPVD
QAEGYHQMIAQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLI
PSSAHGTNPASAQMAGMQVVVVACDKNGNIDLADLRAKAEQHAANLSCIMVTYPSTHGVY
EETIREVCEVVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPG
MGPIGVKSHLAQFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKQ
ASQMAILNANYIATRLKDAFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDF
GFHAPTMSFPVAGTLMVEPTESESKVELDRFIDAMLAIRGEIDRVKAGEWPLEDNPLVNA
PHTQGELVSAWNHPYARELAVFPAGLNNKYWPTVKRLDDVYGDRNLFCSCVPMSEYQ
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory