Comparing BWI76_RS24865 FitnessBrowser__Koxy:BWI76_RS24865 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 2 hits to proteins with known functional sites (download)
P20966 PTS system fructose-specific EIIB'BC component; EIIB'BC-Fru; EC 2.7.1.202 from Escherichia coli (strain K12) (see paper)
43% identity, 94% coverage: 2:442/470 of query aligns to 104:541/563 of P20966
O31645 PTS system mannose-specific EIIBCA component; EIIBCA-Man; EII-Man; EC 2.7.1.191 from Bacillus subtilis (strain 168) (see 2 papers)
39% identity, 96% coverage: 3:453/470 of query aligns to 2:458/650 of O31645
>BWI76_RS24865 FitnessBrowser__Koxy:BWI76_RS24865
MKKIIAVTGCPTGIAHTFMAEEALKTAAKKLNIEIKVETNGASGVENAITPADLKDIYGV
IIAADKDVNAERFNGLPVIEVPVKEAIHHPADLINKFISGQAARRQGISASDDSTEKYER
ESFGRQVYKHLMSGVSNMLPFVVAGGILIAISFLWGIYSADPNSPQYNVIAATLMKVGQQ
AFSIMVPIFTAYIAWSISGRPGMVAGFVGGLLANATGAGFLGGIIAGFAAGYFMLLIRNM
LNGLPRQYEGLKSIFIMPLVGVLVIGVMMVLLGQPVAAINNAMMNWLSSLQEANPILLGI
VVGAMCSFDFGGPVNKAAYVTGTLLLGQGNYFFMAGVSAACITPPLVIALATTFFPKGFS
EEERAAGMVNYILGCTHITEGAIPFAAKDPLRVIPMMMIASSISAVLSYSLQIQVPAPHG
GFLILPLVSKPLMWVLCILAGSACGAVMLGCWRLWQKRNQEATTLAGAIK
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory