Comparing BWI76_RS25050 FitnessBrowser__Koxy:BWI76_RS25050 to proteins with known functional sites using BLASTp with E ≤ 0.001.
Or try Sites on a Tree, PaperBLAST, Conserved Domains, or compare to all protein structures
Found 1 hits to proteins with known functional sites (download)
Q02DS7 Tryptophan-specific transport protein; Tryptophan permease from Pseudomonas aeruginosa (strain UCBPP-PA14) (see paper)
64% identity, 99% coverage: 6:414/414 of query aligns to 8:417/417 of Q02DS7
>BWI76_RS25050 FitnessBrowser__Koxy:BWI76_RS25050
MATLTTTATRPSLFGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSLAALVFTWFCMLHSGL
MILEANLNYRIGSSFDTITKDLLGKGWNLLNGVSIAFVLYILTYAYISASGSILHHTFSE
MSLNVPARAAGFGFALLVAFIVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPTTL
FNVAEKNASYLPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPRTIVKCLVYGTLLALGLY
VVWLLVTMGNIPRPEFIGIAQKGGNIDVLVQALSGVLNSRSLDLLLVIFSNFAVASSFLG
VTLGLFDYLADLFGFDDSALGRFKTAIFTFVPPMVGGLLWPNGFLYAIGYAGLAATIWAA
IVPALLARASRKRFGSPLFRVWGGKPMIALVLLFGLGNVIVHFLSSFNVLPTYQ
Or try a new SitesBLAST search
SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.
Lawrence Berkeley National Laboratory