Comparing CA265_RS06300 FitnessBrowser__Pedo557:CA265_RS06300 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 19 hits to proteins with known functional sites (download)
3a9hA Crystal structure of pqq-dependent sugar dehydrogenase holo-form (see paper)
36% identity, 90% coverage: 35:360/362 of query aligns to 4:333/338 of 3a9hA
3a9gA Crystal structure of pqq-dependent sugar dehydrogenase apo-form (see paper)
36% identity, 90% coverage: 35:360/362 of query aligns to 4:333/338 of 3a9gA
1cq1A Soluble quinoprotein glucose dehydrogenase from acinetobacter calcoaceticus in complex with pqqh2 and glucose (see paper)
33% identity, 87% coverage: 34:349/362 of query aligns to 16:417/444 of 1cq1A
1c9uA Crystal structure of the soluble quinoprotein glucose dehydrogenase in complex with pqq (see paper)
33% identity, 87% coverage: 34:349/362 of query aligns to 16:417/444 of 1c9uA
5minB Apo form of the soluble pqq-dependent glucose dehydrogenase from acinetobacter calcoaceticus
33% identity, 87% coverage: 34:349/362 of query aligns to 16:423/453 of 5minB
1cruA Soluble quinoprotein glucose dehydrogenase from acinetobacter calcoaceticus in complex with pqq and methylhydrazine (see paper)
33% identity, 87% coverage: 34:349/362 of query aligns to 16:421/448 of 1cruA
P13650 Quinoprotein glucose dehydrogenase B; Glucose dehydrogenase B [pyrroloquinoline-quinone]; Soluble glucose dehydrogenase; s-GDH; EC 1.1.5.2 from Acinetobacter calcoaceticus (see paper)
33% identity, 87% coverage: 34:349/362 of query aligns to 40:447/478 of P13650
8re0A Quinoprotein glucose dehydrogenase B (see paper)
33% identity, 87% coverage: 34:349/362 of query aligns to 16:423/452 of 8re0A
3dasA Structure of the pqq-bound form of aldose sugar dehydrogenase (adh) from streptomyces coelicolor
34% identity, 89% coverage: 38:360/362 of query aligns to 12:331/334 of 3dasA
P75804 Aldose sugar dehydrogenase YliI; Asd; Soluble aldose sugar dehydrogenase YliI; EC 1.1.5.- from Escherichia coli (strain K12) (see paper)
31% identity, 87% coverage: 38:353/362 of query aligns to 28:361/371 of P75804
2g8sA Crystal structure of the soluble aldose sugar dehydrogenase (asd) from escherichia coli in the apo-form (see paper)
31% identity, 87% coverage: 38:353/362 of query aligns to 6:339/348 of 2g8sA
2ismB Crystal structure of the putative oxidoreductase (glucose dehydrogenase) (ttha0570) from thermus theromophilus hb8
31% identity, 90% coverage: 35:360/362 of query aligns to 2:332/333 of 2ismB
7cdyA Crystal structure of glucose dehydrogenase
30% identity, 89% coverage: 40:361/362 of query aligns to 6:344/346 of 7cdyA
7cgzA Glucose dehydrogenase
28% identity, 89% coverage: 40:361/362 of query aligns to 6:319/321 of 7cgzA
2wfxB Crystal structure of the complex between human hedgehog-interacting protein hip and sonic hedgehog in the presence of calcium (see paper)
28% identity, 45% coverage: 40:202/362 of query aligns to 8:192/417 of 2wfxB
Sites not aligning to the query:
7pgnA Hhp-c in complex with glycosaminoglycan mimic sos (see paper)
28% identity, 45% coverage: 40:202/362 of query aligns to 10:198/437 of 7pgnA
Sites not aligning to the query:
7pgnB Hhp-c in complex with glycosaminoglycan mimic sos (see paper)
28% identity, 45% coverage: 40:202/362 of query aligns to 9:197/438 of 7pgnB
Sites not aligning to the query:
7pgmB Hhip-c in complex with heparin (see paper)
28% identity, 45% coverage: 40:202/362 of query aligns to 9:192/427 of 7pgmB
Sites not aligning to the query:
Q96QV1 Hedgehog-interacting protein; HHIP; HIP from Homo sapiens (Human) (see 3 papers)
27% identity, 45% coverage: 40:202/362 of query aligns to 222:417/700 of Q96QV1
Sites not aligning to the query:
>CA265_RS06300 FitnessBrowser__Pedo557:CA265_RS06300
MRAILLCLFVMLFVTNCKKNGDDNEDPGTLPDVDLKSKVIVSGLSLPWEMVYGPDNFIWF
TEKAGKISRLNPANGQVTPLLTITEVRTNGEGGLLGMTLHPDFAGNPYVYVVYGYGSTYK
AKVVRYTYSGGGLTSPQVLLDQIPAASIHNGSRLLISGGKLFISTGDAADTGNPQNVNSL
AGKILRINLDGTIPADNPYPNNPLWSLGHRNAQGLIQVGNKIFSSEHGPDSDDEINIIEK
GRNYGWPNIKGYCNESGEQSFCSSNNVAEPLINWTPTIAPSGLAYYNSDYIPQFKNSLLL
AVLKGTKLMQLKLDDAQTKITGTKDFYVNTYGRIRAICQSPEGKIYICTSNGSDDKIVEI
AK
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SitesBLAST's database includes (1) SwissProt entries with experimentally-supported functional features; and (2) protein structures with bound ligands, from the BioLip database.