SitesBLAST
Comparing CA265_RS06730 FitnessBrowser__Pedo557:CA265_RS06730 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 8 hits to proteins with known functional sites (download)
8jl1A Membrane proteins
29% identity, 68% coverage: 84:359/408 of query aligns to 168:482/527 of 8jl1A
- binding acetyl coenzyme *a: V180 (≠ I96), F181 (= F97), F184 (= F100), S191 (≠ A107), S195 (= S111), K212 (≠ A132), R216 (= R136), V247 (= V164), L251 (≠ I168), S471 (= S347), I472 (= I348)
Sites not aligning to the query:
8jkvA Membrane proteins
29% identity, 68% coverage: 84:359/408 of query aligns to 168:482/527 of 8jkvA
8jl4A Membrane proteins
29% identity, 68% coverage: 84:359/408 of query aligns to 174:488/533 of 8jl4A
- binding cholesterol: L307 (≠ M204), P309 (= P206)
- binding coenzyme a: F187 (= F97), F190 (= F100), M194 (≠ S104), S197 (≠ A107), S201 (= S111), K218 (≠ A132), R222 (= R136), V253 (= V164), L257 (≠ I168), S477 (= S347), Y481 (= Y351)
- binding ~{N}-[(2~{S},3~{R},4~{R},5~{S},6~{R})-6-(hydroxymethyl)-2-[[(2~{R},4~{R})-4-methyl-2-oxidanyl-3,4-dihydro-2~{H}-chromen-7-yl]oxy]-4,5-bis(oxidanyl)oxan-3-yl]ethanamide: H174 (= H84), R249 (= R160), E369 (= E242), K433 (= K302), H484 (= H355), E485 (≠ G356), E488 (≠ N359)
Sites not aligning to the query:
- binding coenzyme a: 144, 145, 148, 149, 152, 159, 532
- binding ~{N}-[(2~{S},3~{R},4~{R},5~{S},6~{R})-6-(hydroxymethyl)-2-[[(2~{R},4~{R})-4-methyl-2-oxidanyl-3,4-dihydro-2~{H}-chromen-7-yl]oxy]-4,5-bis(oxidanyl)oxan-3-yl]ethanamide: 163, 164
8vliA Heparan-alpha-glucosaminide N-acetyltransferase
29% identity, 68% coverage: 84:359/408 of query aligns to 184:505/550 of 8vliA
- binding 4-methyl-2-oxo-2H-1-benzopyran-7-yl 2-acetamido-2-deoxy-beta-D-glucopyranoside: H184 (= H84), R259 (= R160), E386 (= E242), K450 (= K302), E502 (≠ G356), E505 (≠ N359)
- binding coenzyme a: F197 (= F97), F200 (= F100), S207 (≠ A107), L210 (≠ F110), S211 (= S111), R232 (= R136), V263 (= V164), L267 (≠ I168), S494 (= S347), Y498 (= Y351)
Sites not aligning to the query:
8vlgA Heparan-alpha-glucosaminide N-acetyltransferase
29% identity, 68% coverage: 84:359/408 of query aligns to 181:502/547 of 8vlgA
- binding 4-methyl-2-oxo-2H-1-benzopyran-7-yl 2-amino-2-deoxy-beta-D-glucopyranoside: R256 (= R160), V260 (= V164), Y365 (vs. gap), E383 (= E242), K447 (= K302), E502 (≠ N359)
- binding acetyl coenzyme *a: H181 (= H84), V193 (≠ I96), F194 (= F97), F197 (= F100), M201 (≠ S104), S204 (≠ A107), L207 (≠ F110), S208 (= S111), R229 (= R136), V260 (= V164), L264 (≠ I168), S491 (= S347), Y495 (= Y351)
Sites not aligning to the query:
8tu9A Cryo-em structure of hgsnat-acetyl-coa complex at ph 7.5 (see paper)
29% identity, 68% coverage: 84:359/408 of query aligns to 167:488/533 of 8tu9A
Sites not aligning to the query:
Q68CP4 Heparan-alpha-glucosaminide N-acetyltransferase; Transmembrane protein 76; EC 2.3.1.78 from Homo sapiens (Human) (see 10 papers)
29% identity, 68% coverage: 84:359/408 of query aligns to 297:618/663 of Q68CP4
- H297 (= H84) active site; mutation to A: Loss of enzymatic activity, but correctly targeted and processed.
- N301 (= N88) to K: in MPS3C; retained in the endoplasmic reticulum; loss of enzymatic activity
- P311 (= P98) to L: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- C333 (≠ N124) mutation to S: No loss of intralysosomal proteolytic cleavage and enzymatic activity.
- R372 (= R160) to C: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum; to H: in MPS3C; retained in the endoplasmic reticulum; loss of enzymatic activity
- C402 (vs. gap) mutation to S: No loss of intralysosomal proteolytic cleavage and enzymatic activity.
- W431 (≠ L195) to C: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- G452 (vs. gap) to S: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum; to V: in MPS3C; shows practically no enzyme activity
- C462 (vs. gap) mutation to S: Complete loss of intralysosomal proteolytic cleavage and enzymatic activity. Reduced oligomer formation.
- L473 (= L228) to P: in MPS3C; shows practically no enzyme activity
- H479 (= H235) mutation to A: Loss of intralysosomal proteolytic cleavage and enzymatic activity, retained in the endoplasmic reticulum.
- E499 (= E242) to K: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- V509 (≠ A252) to L: in MPS3C; likely benign; no loss of enzymatic activity
- M510 (≠ T253) to K: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- G514 (= G257) to E: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- A517 (≠ T260) to E: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- S546 (≠ T282) to F: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- K551 (≠ L287) to Q: in MPS3C; likely benign; no loss of enzymatic activity; dbSNP:rs73569592
- S567 (≠ T306) to C: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- S569 (= S308) to L: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity
- D590 (= D329) to V: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity
- P599 (= P339) to L: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity
Sites not aligning to the query:
- 82 A → V: in MPS3C; shows practically no enzyme activity
- 104 C → F: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum; loss of intralysosomal proteolytic cleavage
- 107 C→S: Loss of intralysosomal proteolytic cleavage and enzymatic activity. Reduced oligomer formation.
- 141 L → P: in MPS3C; shows practically no enzyme activity
- 142 modified: carbohydrate, N-linked (GlcNAc...) asparagine
- 151 C→S: Loss of intralysosomal proteolytic cleavage and enzymatic activity. Reduced oligomer formation.
- 165 L → P: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- 179 C→S: Loss of intralysosomal proteolytic cleavage and enzymatic activity.
- 236 L→A: Displayed both lysosomal and plasma membrane localization, reduced intralysosomal proteolytic cleavage and enzymatic activity; when associated with A-209.
- 237 I→A: Displayed both lysosomal and plasma membrane localization, reduced intralysosomal proteolytic cleavage and enzymatic activity; when associated with A-208.
- 265 P → Q: in MPS3C; likely benign; does not influence stability; does not influence activity; does not influence cellular localization of the enzyme
- 290 G → R: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- 633 H→A: Loss of intralysosomal proteolytic cleavage and enzymatic activity, retained in the endoplasmic reticulum.
- 643 A → T: in RP73 and MPS3C; uncertain significance; may act as a modifier of disease severity in patients with retinitis pigmentosa; has a negligible effect on the enzyme expression; moderately reduced enzyme activity; dbSNP:rs112029032
Q3UDW8 Heparan-alpha-glucosaminide N-acetyltransferase; Transmembrane protein 76; EC 2.3.1.78 from Mus musculus (Mouse) (see paper)
28% identity, 68% coverage: 84:360/408 of query aligns to 290:613/656 of Q3UDW8
Sites not aligning to the query:
- 157 modified: carbohydrate, N-linked (GlcNAc...) asparagine
Query Sequence
>CA265_RS06730 FitnessBrowser__Pedo557:CA265_RS06730
MPDTETIQQNIHAPEKKRLLSLDALRGFDMFWIISGEGIFHGLASGVMKEHALIRDPSDW
KIATKKSLSFFEELLIGISNQLHHSTWNGFTFYDLIFPLFIFISGVAMPFSYEKHLSTKH
DNQNSAKSIYTALIRRTLILIILGMVVNGLLKWQGYEATRFASVLGRIALSTFFAALIYL
NFSRNQQIIWLAGILVGYYIFMIMIPVPGFGNAVLTPEGNLAAYIDRLWLPGKLHRSVYD
PEGLLSTIPAIATALLGVFTGSFLHSKNNRFTPNKKVILLLTAGLVLIFAGLFWNIFFPI
NKNMWTSSFVLLTGGFSVILLALFYYIIDISGHQKWSTPFIWIGTNSILIYVCAHGLFNF
ESTSQFLFGGIITKLPLIWQQAGLWTGVLLIQLAILKFLYDRKWFLKI
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SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory