SitesBLAST
Comparing CA265_RS06730 FitnessBrowser__Pedo557:CA265_RS06730 to proteins with known functional sites using BLASTp with E ≤ 0.001.
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Found 3 hits to proteins with known functional sites (download)
8tu9A Cryo-em structure of hgsnat-acetyl-coa complex at ph 7.5
29% identity, 68% coverage: 84:359/408 of query aligns to 167:488/533 of 8tu9A
Sites not aligning to the query:
Q68CP4 Heparan-alpha-glucosaminide N-acetyltransferase; Transmembrane protein 76; EC 2.3.1.78 from Homo sapiens (Human) (see 10 papers)
29% identity, 68% coverage: 84:359/408 of query aligns to 297:618/663 of Q68CP4
- H297 (= H84) active site; mutation to A: Loss of enzymatic activity, but correctly targeted and processed.
- N301 (= N88) to K: in MPS3C; retained in the endoplasmic reticulum; loss of enzymatic activity
- P311 (= P98) to L: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- C333 (≠ N124) mutation to S: No loss of intralysosomal proteolytic cleavage and enzymatic activity.
- R372 (= R160) to C: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum; to H: in MPS3C; retained in the endoplasmic reticulum; loss of enzymatic activity
- C402 (vs. gap) mutation to S: No loss of intralysosomal proteolytic cleavage and enzymatic activity.
- W431 (≠ L195) to C: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- G452 (vs. gap) to S: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum; to V: in MPS3C; shows practically no enzyme activity
- C462 (vs. gap) mutation to S: Complete loss of intralysosomal proteolytic cleavage and enzymatic activity. Reduced oligomer formation.
- L473 (= L228) to P: in MPS3C; shows practically no enzyme activity
- H479 (= H235) mutation to A: Loss of intralysosomal proteolytic cleavage and enzymatic activity, retained in the endoplasmic reticulum.
- E499 (= E242) to K: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- V509 (≠ A252) to L: in MPS3C; likely benign; no loss of enzymatic activity
- M510 (≠ T253) to K: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- G514 (= G257) to E: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- A517 (≠ T260) to E: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- S546 (≠ T282) to F: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- K551 (≠ L287) to Q: in MPS3C; likely benign; no loss of enzymatic activity; dbSNP:rs73569592
- S567 (≠ T306) to C: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- S569 (= S308) to L: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity
- D590 (= D329) to V: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity
- P599 (= P339) to L: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity
Sites not aligning to the query:
- 82 A → V: in MPS3C; shows practically no enzyme activity
- 104 C → F: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum; loss of intralysosomal proteolytic cleavage
- 107 C→S: Loss of intralysosomal proteolytic cleavage and enzymatic activity. Reduced oligomer formation.
- 141 L → P: in MPS3C; shows practically no enzyme activity
- 142 modified: carbohydrate, N-linked (GlcNAc...) asparagine
- 151 C→S: Loss of intralysosomal proteolytic cleavage and enzymatic activity. Reduced oligomer formation.
- 165 L → P: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- 179 C→S: Loss of intralysosomal proteolytic cleavage and enzymatic activity.
- 236 L→A: Displayed both lysosomal and plasma membrane localization, reduced intralysosomal proteolytic cleavage and enzymatic activity; when associated with A-209.
- 237 I→A: Displayed both lysosomal and plasma membrane localization, reduced intralysosomal proteolytic cleavage and enzymatic activity; when associated with A-208.
- 265 P → Q: in MPS3C; likely benign; does not influence stability; does not influence activity; does not influence cellular localization of the enzyme
- 290 G → R: in MPS3C; results in a negligible amount of protein synthesis; very low enzyme activity; retained in the endoplasmic reticulum
- 633 H→A: Loss of intralysosomal proteolytic cleavage and enzymatic activity, retained in the endoplasmic reticulum.
- 643 A → T: in RP73 and MPS3C; uncertain significance; may act as a modifier of disease severity in patients with retinitis pigmentosa; has a negligible effect on the enzyme expression; moderately reduced enzyme activity; dbSNP:rs112029032
Q3UDW8 Heparan-alpha-glucosaminide N-acetyltransferase; Transmembrane protein 76; EC 2.3.1.78 from Mus musculus (Mouse) (see paper)
28% identity, 68% coverage: 84:360/408 of query aligns to 290:613/656 of Q3UDW8
Sites not aligning to the query:
- 157 modified: carbohydrate, N-linked (GlcNAc...) asparagine
Query Sequence
>CA265_RS06730 FitnessBrowser__Pedo557:CA265_RS06730
MPDTETIQQNIHAPEKKRLLSLDALRGFDMFWIISGEGIFHGLASGVMKEHALIRDPSDW
KIATKKSLSFFEELLIGISNQLHHSTWNGFTFYDLIFPLFIFISGVAMPFSYEKHLSTKH
DNQNSAKSIYTALIRRTLILIILGMVVNGLLKWQGYEATRFASVLGRIALSTFFAALIYL
NFSRNQQIIWLAGILVGYYIFMIMIPVPGFGNAVLTPEGNLAAYIDRLWLPGKLHRSVYD
PEGLLSTIPAIATALLGVFTGSFLHSKNNRFTPNKKVILLLTAGLVLIFAGLFWNIFFPI
NKNMWTSSFVLLTGGFSVILLALFYYIIDISGHQKWSTPFIWIGTNSILIYVCAHGLFNF
ESTSQFLFGGIITKLPLIWQQAGLWTGVLLIQLAILKFLYDRKWFLKI
Or try a new SitesBLAST search
SitesBLAST's Database
SitesBLAST's database includes
(1) SwissProt
entries with experimentally-supported functional features;
and (2) protein structures with bound ligands, from the
BioLip database.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory